RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Terf2O35144 541 aa9.19□□□□□ -0.94
Trim40-201ENSMUST00000087158 NmiO35309 314 aa9.19□□□□□ -0.94
Trim40-201ENSMUST00000087158 Pde4dQ01063 747 aa9.19□□□□□ -0.94
Trim40-201ENSMUST00000087158 Nol8Q3UHX0 1147 aaKnown RBP9.19□□□□□ -0.94
Trim40-201ENSMUST00000087158 GpkowQ56A08 488 aa9.19□□□□□ -0.94
Trim40-201ENSMUST00000087158 Rgl2Q61193 778 aa9.19□□□□□ -0.94
Trim40-201ENSMUST00000087158 Pde3bQ61409 1100 aa9.19□□□□□ -0.94
Trim40-201ENSMUST00000087158 Tmem87bQ8BKU8 555 aa9.19□□□□□ -0.94
Trim40-201ENSMUST00000087158 AbraQ8BUZ1 375 aa9.19□□□□□ -0.94
Trim40-201ENSMUST00000087158 Gigyf1Q99MR1 1044 aaKnown RBP9.19□□□□□ -0.94
Trim40-201ENSMUST00000087158 Isca1Q9D924 129 aa9.19□□□□□ -0.94
Trim40-201ENSMUST00000087158 InsrrQ9WTL4 1300 aa9.19□□□□□ -0.94
Trim40-201ENSMUST00000087158 Nwd2Q6P5U7 1742 aa9.18□□□□□ -0.94
Trim40-201ENSMUST00000087158 Eno4Q8C042 619 aa9.18□□□□□ -0.94
Trim40-201ENSMUST00000087158 Dnttip2Q8R2M2 758 aaKnown RBP9.18□□□□□ -0.94
Trim40-201ENSMUST00000087158 Rrp9Q91WM3 475 aaKnown RBP9.18□□□□□ -0.94
Trim40-201ENSMUST00000087158 Cwc25Q9DBF7 416 aa9.18□□□□□ -0.94
Trim40-201ENSMUST00000087158 Ehd4Q9EQP2 541 aa9.18□□□□□ -0.94
Trim40-201ENSMUST00000087158 DmtnQ9WV69 405 aa9.18□□□□□ -0.94
Trim40-201ENSMUST00000087158 Sipa1l3G3X9J0 1776 aa9.18□□□□□ -0.94
Trim40-201ENSMUST00000087158 Sos2Q02384 1333 aa9.17□□□□□ -0.94
Trim40-201ENSMUST00000087158 Ddb1Q3U1J4 1140 aaKnown RBP9.17□□□□□ -0.94
Trim40-201ENSMUST00000087158 Prune1Q8BIW1 454 aa9.17□□□□□ -0.94
Trim40-201ENSMUST00000087158 Smc4Q8CG47 1286 aa9.17□□□□□ -0.94
Trim40-201ENSMUST00000087158 Kdm4cQ8VCD7 1054 aa9.17□□□□□ -0.94
Trim40-201ENSMUST00000087158 Cacna1sQ02789 1880 aa9.17□□□□□ -0.94
Trim40-201ENSMUST00000087158 Mrc1Q61830 1456 aa9.17□□□□□ -0.94
Trim40-201ENSMUST00000087158 Ildr2B5TVM2 661 aa9.17□□□□□ -0.94
Trim40-201ENSMUST00000087158 Myd88P22366 296 aa9.17□□□□□ -0.94
Trim40-201ENSMUST00000087158 Adora1Q60612 326 aa9.17□□□□□ -0.94
Trim40-201ENSMUST00000087158 Clcn1Q64347 994 aa9.17□□□□□ -0.94
Trim40-201ENSMUST00000087158 Isy1Q69ZQ2 285 aaKnown RBP9.17□□□□□ -0.94
Trim40-201ENSMUST00000087158 Unc5clQ6R653 518 aa9.17□□□□□ -0.94
Trim40-201ENSMUST00000087158 EngaseQ8BX80 734 aa9.17□□□□□ -0.94
Trim40-201ENSMUST00000087158 Sf3a1Q8K4Z5 791 aaKnown RBP9.17□□□□□ -0.94
Trim40-201ENSMUST00000087158 Taf5lQ91WQ5 589 aa9.17□□□□□ -0.94
Trim40-201ENSMUST00000087158 Psrc1Q9D0P7 329 aa9.17□□□□□ -0.94
Trim40-201ENSMUST00000087158 Kndc1Q0KK55 1742 aa9.17□□□□□ -0.94
Trim40-201ENSMUST00000087158 Hsp90b1P08113 802 aaKnown RBP9.16□□□□□ -0.94
Trim40-201ENSMUST00000087158 Fam228bQ497Q6 232 aa9.16□□□□□ -0.94
Trim40-201ENSMUST00000087158 Nip7Q9CXK8 180 aaKnown RBP9.16□□□□□ -0.94
Trim40-201ENSMUST00000087158 Fam213aQ9CYH2 218 aa9.16□□□□□ -0.94
Trim40-201ENSMUST00000087158 Ltb4r2Q9JJL9 360 aa9.16□□□□□ -0.94
Trim40-201ENSMUST00000087158 MetP16056 1379 aa9.16□□□□□ -0.94
Trim40-201ENSMUST00000087158 Ddit3P35639 168 aa9.16□□□□□ -0.94
Trim40-201ENSMUST00000087158 CalcaP70160 136 aa9.16□□□□□ -0.94
Trim40-201ENSMUST00000087158 Tbc1d4Q8BYJ6 1307 aa9.15□□□□□ -0.94
Trim40-201ENSMUST00000087158 Ets1P27577 440 aa9.15□□□□□ -0.94
Trim40-201ENSMUST00000087158 Sf3b2Q3UJB0 878 aaKnown RBP9.15□□□□□ -0.94
Trim40-201ENSMUST00000087158 Ankib1Q6ZPS6 1085 aa9.15□□□□□ -0.94
Trim40-201ENSMUST00000087158 Ssh1Q76I79 1042 aa9.15□□□□□ -0.94
Trim40-201ENSMUST00000087158 NexnQ7TPW1 607 aa9.15□□□□□ -0.94
Trim40-201ENSMUST00000087158 Q8C5K5 320 aa9.15□□□□□ -0.94
Trim40-201ENSMUST00000087158 Edc3Q8K2D3 508 aaKnown RBP9.15□□□□□ -0.94
Trim40-201ENSMUST00000087158 Prl3d3A0A0M6L0J6 224 aa9.14□□□□□ -0.95
Trim40-201ENSMUST00000087158 VaspP70460 375 aaKnown RBP9.14□□□□□ -0.95
Trim40-201ENSMUST00000087158 Ppp4r3aQ6P2K6 820 aa9.14□□□□□ -0.95
Trim40-201ENSMUST00000087158 Mrps27Q8BK72 415 aaKnown RBP9.14□□□□□ -0.95
Trim40-201ENSMUST00000087158 Brf1Q8CFK2 676 aa9.14□□□□□ -0.95
Trim40-201ENSMUST00000087158 Slc26a8Q8R0C3 999 aa9.14□□□□□ -0.95
Trim40-201ENSMUST00000087158 Rbm10Q99KG3 930 aaKnown RBP9.14□□□□□ -0.95
Trim40-201ENSMUST00000087158 Bag3Q9JLV1 577 aaKnown RBP9.14□□□□□ -0.95
Trim40-201ENSMUST00000087158 Tnrc6cQ3UHC0 1690 aaKnown RBP9.14□□□□□ -0.95
Trim40-201ENSMUST00000087158 MccE9PWI3 1003 aa9.14□□□□□ -0.95
Trim40-201ENSMUST00000087158 Prl3d2F6R3P9 224 aa9.14□□□□□ -0.95
Trim40-201ENSMUST00000087158 Rbm27Q5SFM8 1060 aaKnown RBP9.14□□□□□ -0.95
Trim40-201ENSMUST00000087158 Cnksr2Q80YA9 1032 aa9.14□□□□□ -0.95
Trim40-201ENSMUST00000087158 Arap2Q8BZ05 1703 aa9.14□□□□□ -0.95
Trim40-201ENSMUST00000087158 AppP12023 770 aa9.13□□□□□ -0.95
Trim40-201ENSMUST00000087158 Anapc15P60007 132 aa9.13□□□□□ -0.95
Trim40-201ENSMUST00000087158 Nlrp1aQ2LKU9 1182 aa9.13□□□□□ -0.95
Trim40-201ENSMUST00000087158 Rhot2Q8JZN7 620 aa9.13□□□□□ -0.95
Trim40-201ENSMUST00000087158 Emilin2Q8K482 1074 aa9.13□□□□□ -0.95
Trim40-201ENSMUST00000087158 Stk3Q9JI10 497 aa9.13□□□□□ -0.95
Trim40-201ENSMUST00000087158 AtrnQ9WU60 1428 aa9.13□□□□□ -0.95
Trim40-201ENSMUST00000087158 Casz1Q9CWL2 1761 aa9.13□□□□□ -0.95
Trim40-201ENSMUST00000087158 Prr29B1ARI9 187 aa9.13□□□□□ -0.95
Trim40-201ENSMUST00000087158 UncxO08934 530 aa9.13□□□□□ -0.95
Trim40-201ENSMUST00000087158 Sult6b1P0CC03 303 aa9.13□□□□□ -0.95
Trim40-201ENSMUST00000087158 Il4rP16382 810 aa9.13□□□□□ -0.95
Trim40-201ENSMUST00000087158 Jarid2Q62315 1234 aa9.13□□□□□ -0.95
Trim40-201ENSMUST00000087158 Nlrp3Q8R4B8 1033 aa9.13□□□□□ -0.95
Trim40-201ENSMUST00000087158 Zkscan16A2ALW2 728 aa9.12□□□□□ -0.95
Trim40-201ENSMUST00000087158 Rfx1P48377 963 aa9.12□□□□□ -0.95
Trim40-201ENSMUST00000087158 Neurod6P48986 337 aa9.12□□□□□ -0.95
Trim40-201ENSMUST00000087158 Ttc19Q8CC21 365 aa9.12□□□□□ -0.95
Trim40-201ENSMUST00000087158 Dis3l2Q8CI75 870 aaKnown RBP9.12□□□□□ -0.95
Trim40-201ENSMUST00000087158 Zbtb1Q91VL9 713 aa9.12□□□□□ -0.95
Trim40-201ENSMUST00000087158 Rgs17Q9QZB0 210 aa9.12□□□□□ -0.95
Trim40-201ENSMUST00000087158 Pmfbp1Q9WVQ0 1022 aa9.12□□□□□ -0.95
Trim40-201ENSMUST00000087158 Brpf1B2RRD7 1212 aa9.11□□□□□ -0.95
Trim40-201ENSMUST00000087158 Ppfia1B2RXQ2 1266 aa9.11□□□□□ -0.95
Trim40-201ENSMUST00000087158 InhbeO08717 350 aa9.11□□□□□ -0.95
Trim40-201ENSMUST00000087158 Fkbp1aP26883 108 aaKnown RBP9.11□□□□□ -0.95
Trim40-201ENSMUST00000087158 4930504O13RikQ8C5Z9 145 aa9.11□□□□□ -0.95
Trim40-201ENSMUST00000087158 Klc3Q91W40 508 aa9.11□□□□□ -0.95
Trim40-201ENSMUST00000087158 Ric1Q69ZJ7 1422 aa9.11□□□□□ -0.95
Trim40-201ENSMUST00000087158 Cyp19a1P28649 503 aa9.11□□□□□ -0.95
Trim40-201ENSMUST00000087158 Plcb3P51432 1234 aaKnown RBP9.11□□□□□ -0.95
Trim40-201ENSMUST00000087158 Rsph3aQ3UFY4 516 aa9.11□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms