RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Eif3aP23116 1344 aaKnown RBP13.52□□□□□ -0.24
Vps54-201ENSMUST00000006221 Dzip1Q8BMD2 852 aa13.52□□□□□ -0.24
Vps54-201ENSMUST00000006221 LratQ9JI60 231 aa13.52□□□□□ -0.24
Vps54-201ENSMUST00000006221 Evi5lH3BKQ3 813 aa13.52□□□□□ -0.25
Vps54-201ENSMUST00000006221 Lnx1O70263 728 aa13.52□□□□□ -0.25
Vps54-201ENSMUST00000006221 Nfe2l3Q9WTM4 660 aa13.52□□□□□ -0.25
Vps54-201ENSMUST00000006221 Hvcn1Q3U2S8 269 aa13.52□□□□□ -0.25
Vps54-201ENSMUST00000006221 Leo1Q5XJE5 667 aa13.52□□□□□ -0.25
Vps54-201ENSMUST00000006221 1700006A11RikB9EHI3 544 aa13.51□□□□□ -0.25
Vps54-201ENSMUST00000006221 NmiO35309 314 aa13.51□□□□□ -0.25
Vps54-201ENSMUST00000006221 FanccP50652 591 aa13.51□□□□□ -0.25
Vps54-201ENSMUST00000006221 DbnlQ62418 436 aa13.51□□□□□ -0.25
Vps54-201ENSMUST00000006221 Nlrp9bQ66X22 1003 aa13.51□□□□□ -0.25
Vps54-201ENSMUST00000006221 Add3Q9QYB5 706 aaKnown RBP13.51□□□□□ -0.25
Vps54-201ENSMUST00000006221 NcapgE9PWG6 1004 aa13.51□□□□□ -0.25
Vps54-201ENSMUST00000006221 Ppfia3P60469 1194 aa13.51□□□□□ -0.25
Vps54-201ENSMUST00000006221 Ddx17Q501J6 650 aaKnown RBP13.51□□□□□ -0.25
Vps54-201ENSMUST00000006221 Larp1Q6ZQ58 1072 aaKnown RBP13.51□□□□□ -0.25
Vps54-201ENSMUST00000006221 Atf7Q8R0S1 413 aa13.51□□□□□ -0.25
Vps54-201ENSMUST00000006221 NaspQ99MD9 773 aaKnown RBP13.51□□□□□ -0.25
Vps54-201ENSMUST00000006221 Tns3Q5SSZ5 1440 aa13.5□□□□□ -0.25
Vps54-201ENSMUST00000006221 Cnnm1Q0GA42 951 aa13.5□□□□□ -0.25
Vps54-201ENSMUST00000006221 Serpina10Q8R121 448 aa13.5□□□□□ -0.25
Vps54-201ENSMUST00000006221 Igbp1bQ9QZ29 343 aa13.5□□□□□ -0.25
Vps54-201ENSMUST00000006221 GpkowQ56A08 488 aa13.5□□□□□ -0.25
Vps54-201ENSMUST00000006221 Kcnf1Q7TSH7 493 aa13.5□□□□□ -0.25
Vps54-201ENSMUST00000006221 Rps6kb1Q8BSK8 525 aa13.5□□□□□ -0.25
Vps54-201ENSMUST00000006221 Cavin1O54724 392 aa13.5□□□□□ -0.25
Vps54-201ENSMUST00000006221 Usp25P57080 1055 aa13.5□□□□□ -0.25
Vps54-201ENSMUST00000006221 Tbc1d31Q6NXY1 996 aa13.5□□□□□ -0.25
Vps54-201ENSMUST00000006221 Fam50bQ9WTJ8 334 aa13.5□□□□□ -0.25
Vps54-201ENSMUST00000006221 GnpatP98192 678 aa13.5□□□□□ -0.25
Vps54-201ENSMUST00000006221 Vps54Q5SPW0 977 aa13.5□□□□□ -0.25
Vps54-201ENSMUST00000006221 StrbpQ91WM1 672 aaKnown RBP13.5□□□□□ -0.25
Vps54-201ENSMUST00000006221 SrrtQ99MR6 875 aaKnown RBP13.5□□□□□ -0.25
Vps54-201ENSMUST00000006221 Pus3Q9JI38 481 aa13.5□□□□□ -0.25
Vps54-201ENSMUST00000006221 Col14a1Q80X19 1797 aa13.5□□□□□ -0.25
Vps54-201ENSMUST00000006221 TnrQ8BYI9 1358 aa13.49□□□□□ -0.25
Vps54-201ENSMUST00000006221 Ptgs1P22437 602 aa13.49□□□□□ -0.25
Vps54-201ENSMUST00000006221 ThemisQ8BGW0 636 aa13.49□□□□□ -0.25
Vps54-201ENSMUST00000006221 Inpp5bQ8K337 993 aa13.49□□□□□ -0.25
Vps54-201ENSMUST00000006221 Mybbp1aQ7TPV4 1344 aaKnown RBP13.49□□□□□ -0.25
Vps54-201ENSMUST00000006221 Ncbp1Q3UYV9 790 aaKnown RBP13.49□□□□□ -0.25
Vps54-201ENSMUST00000006221 Iqsec3Q3TES0 1195 aa13.49□□□□□ -0.25
Vps54-201ENSMUST00000006221 Nap1l3Q794H2 544 aa13.49□□□□□ -0.25
Vps54-201ENSMUST00000006221 OptnQ8K3K8 584 aa13.49□□□□□ -0.25
Vps54-201ENSMUST00000006221 Bloc1s2Q9CWG9 143 aa13.49□□□□□ -0.25
Vps54-201ENSMUST00000006221 Kansl3A2RSY1 903 aaKnown RBP13.48□□□□□ -0.25
Vps54-201ENSMUST00000006221 Fam84aQ9D650 292 aa13.48□□□□□ -0.25
Vps54-201ENSMUST00000006221 Ubash3aQ3V3E1 624 aa13.48□□□□□ -0.25
Vps54-201ENSMUST00000006221 Dis3l2Q8CI75 870 aaKnown RBP13.48□□□□□ -0.25
Vps54-201ENSMUST00000006221 FosbP13346 338 aa13.48□□□□□ -0.25
Vps54-201ENSMUST00000006221 Lins1Q3U1D0 764 aa13.48□□□□□ -0.25
Vps54-201ENSMUST00000006221 Ddx46Q569Z5 1032 aaKnown RBP13.48□□□□□ -0.25
Vps54-201ENSMUST00000006221 Chmp7Q8R1T1 451 aa13.48□□□□□ -0.25
Vps54-201ENSMUST00000006221 Rbbp8nlA2ABX0 614 aa13.48□□□□□ -0.25
Vps54-201ENSMUST00000006221 Phkg2Q9DB30 406 aa13.48□□□□□ -0.25
Vps54-201ENSMUST00000006221 Scaf1Q5U4C3 1256 aaKnown RBP13.47□□□□□ -0.25
Vps54-201ENSMUST00000006221 TrhQ62361 256 aa13.47□□□□□ -0.25
Vps54-201ENSMUST00000006221 Psma5Q9Z2U1 241 aaKnown RBP13.47□□□□□ -0.25
Vps54-201ENSMUST00000006221 MypnQ5DTJ9 1315 aa13.47□□□□□ -0.25
Vps54-201ENSMUST00000006221 Gli3Q61602 1583 aa13.47□□□□□ -0.25
Vps54-201ENSMUST00000006221 Rps6ka5Q8C050 863 aa13.47□□□□□ -0.25
Vps54-201ENSMUST00000006221 Rbm42Q91V81 474 aaKnown RBP13.47□□□□□ -0.25
Vps54-201ENSMUST00000006221 Wdr78E9PYY5 807 aa13.47□□□□□ -0.25
Vps54-201ENSMUST00000006221 CebpzP53569 1052 aaKnown RBP13.47□□□□□ -0.25
Vps54-201ENSMUST00000006221 Pde3bQ61409 1100 aa13.47□□□□□ -0.25
Vps54-201ENSMUST00000006221 Simc1E9Q6E9 1354 aa13.47□□□□□ -0.25
Vps54-201ENSMUST00000006221 NpeppsQ11011 920 aa13.46□□□□□ -0.25
Vps54-201ENSMUST00000006221 Ifit1Q64282 463 aa13.46□□□□□ -0.25
Vps54-201ENSMUST00000006221 Zranb3Q6NZP1 1069 aa13.46□□□□□ -0.25
Vps54-201ENSMUST00000006221 Ripor2Q80U16 1078 aa13.46□□□□□ -0.25
Vps54-201ENSMUST00000006221 Tyro3P55144 880 aa13.46□□□□□ -0.25
Vps54-201ENSMUST00000006221 PdcQ9QW08 244 aa13.46□□□□□ -0.25
Vps54-201ENSMUST00000006221 Aox1O54754 1333 aa13.46□□□□□ -0.25
Vps54-201ENSMUST00000006221 AppP12023 770 aa13.46□□□□□ -0.26
Vps54-201ENSMUST00000006221 Rnf20Q5DTM8 973 aa13.46□□□□□ -0.26
Vps54-201ENSMUST00000006221 Kank4Q6P9J5 1016 aa13.46□□□□□ -0.26
Vps54-201ENSMUST00000006221 ZwintQ9CQU5 252 aa13.46□□□□□ -0.26
Vps54-201ENSMUST00000006221 InsrrQ9WTL4 1300 aa13.45□□□□□ -0.26
Vps54-201ENSMUST00000006221 Zkscan7E9PVW1 718 aa13.45□□□□□ -0.26
Vps54-201ENSMUST00000006221 Oxsr1Q6P9R2 527 aa13.45□□□□□ -0.26
Vps54-201ENSMUST00000006221 Cep57l1Q8VDS7 400 aa13.45□□□□□ -0.26
Vps54-201ENSMUST00000006221 Ercc3P49135 783 aa13.45□□□□□ -0.26
Vps54-201ENSMUST00000006221 RubcnlQ3TD16 648 aa13.45□□□□□ -0.26
Vps54-201ENSMUST00000006221 Gpatch11Q3UFS4 262 aa13.45□□□□□ -0.26
Vps54-201ENSMUST00000006221 Soga3Q6NZL0 945 aa13.45□□□□□ -0.26
Vps54-201ENSMUST00000006221 Ppp6r1Q7TSI3 856 aa13.45□□□□□ -0.26
Vps54-201ENSMUST00000006221 Q8C5K5 320 aa13.45□□□□□ -0.26
Vps54-201ENSMUST00000006221 Lrrfip2Q91WK0 415 aa13.45□□□□□ -0.26
Vps54-201ENSMUST00000006221 Nrbp1Q99J45 535 aa13.45□□□□□ -0.26
Vps54-201ENSMUST00000006221 Hmx1O70218 332 aa13.45□□□□□ -0.26
Vps54-201ENSMUST00000006221 Dixdc1Q80Y83 711 aa13.45□□□□□ -0.26
Vps54-201ENSMUST00000006221 Ano1Q8BHY3 960 aa13.45□□□□□ -0.26
Vps54-201ENSMUST00000006221 Plcd1Q8R3B1 756 aa13.45□□□□□ -0.26
Vps54-201ENSMUST00000006221 CrklP47941 303 aa13.44□□□□□ -0.26
Vps54-201ENSMUST00000006221 Asic4Q7TNS7 539 aa13.44□□□□□ -0.26
Vps54-201ENSMUST00000006221 Slain2Q8CI08 581 aa13.44□□□□□ -0.26
Vps54-201ENSMUST00000006221 TkfcQ8VC30 578 aa13.44□□□□□ -0.26
Vps54-201ENSMUST00000006221 Wdr33Q8K4P0 1330 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms