RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 PRPF18Q99633 342 aaKnown RBP6.77□□□□□ -1.33
PHGDH-225ENST00000641720 TTYH2Q9BSA4 534 aa6.77□□□□□ -1.33
PHGDH-225ENST00000641720 NXF5Q9H1B4 397 aaKnown RBP6.77□□□□□ -1.33
PHGDH-225ENST00000641720 SERHL2Q9H4I8 314 aa6.77□□□□□ -1.33
PHGDH-225ENST00000641720 CDCP1Q9H5V8 836 aa6.77□□□□□ -1.33
PHGDH-225ENST00000641720 FOLH1BQ9HBA9 442 aa6.77□□□□□ -1.33
PHGDH-225ENST00000641720 NEUROD4Q9HD90 331 aa6.77□□□□□ -1.33
PHGDH-225ENST00000641720 ZCCHC3Q9NUD5 404 aaKnown RBP6.77□□□□□ -1.33
PHGDH-225ENST00000641720 DDX18Q9NVP1 670 aaKnown RBP6.77□□□□□ -1.33
PHGDH-225ENST00000641720 CCDC167Q9P0B6 97 aa6.77□□□□□ -1.33
PHGDH-225ENST00000641720 NTMQ9P121 344 aa6.77□□□□□ -1.33
PHGDH-225ENST00000641720 ARMCX1Q9P291 453 aa6.77□□□□□ -1.33
PHGDH-225ENST00000641720 MYOTQ9UBF9 498 aa6.77□□□□□ -1.33
PHGDH-225ENST00000641720 TRIM33Q9UPN9 1127 aa6.77□□□□□ -1.33
PHGDH-225ENST00000641720 MAPRE3Q9UPY8 281 aa6.77□□□□□ -1.33
PHGDH-225ENST00000641720 SNX8Q9Y5X2 465 aa6.77□□□□□ -1.33
PHGDH-225ENST00000641720 TGP01266 2768 aa6.77□□□□□ -1.33
PHGDH-225ENST00000641720 PLCE1Q9P212 2302 aa6.77□□□□□ -1.33
PHGDH-225ENST00000641720 CADP27708 2225 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 A0A1B0GVC2 190 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 PRSS51A0A1B0GVH4 220 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 C2orf92A0A1B0GVN3 265 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 KDM4EB2RXH2 506 aaPredicted RBP6.76□□□□□ -1.33
PHGDH-225ENST00000641720 CFLARO15519 480 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 EMC8O43402 210 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 COQ9O75208 318 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 ITGA10O75578 1167 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 OR6B1O95007 311 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 RAF1P04049 648 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 IL6P05231 212 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 GSNP06396 782 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 CT45A8P0DMV1 189 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 CT45A9P0DMV2 189 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 ACP2P11117 423 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 DDX5P17844 614 aaKnown RBP6.76□□□□□ -1.33
PHGDH-225ENST00000641720 DNASE1P24855 282 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 SOX3P41225 446 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 HLCSP50747 726 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 KLF10Q13118 480 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 TP53BP2Q13625 1128 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 MAPKAPK3Q16644 382 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 SPDYE7PQ495Y7 208 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 FLYWCH1Q4VC44 716 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 CT45A2Q5DJT8 189 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 PAGE3Q5JUK9 113 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 ANXA8L1Q5VT79 327 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 METTL21CQ5VZV1 264 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 MFSD12Q6NUT3 480 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 LYPD8Q6UX82 237 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 MSANTD1Q6ZTZ1 278 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 SLC29A4Q7RTT9 530 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 PIGWQ7Z7B1 504 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 MTDHQ86UE4 582 aaKnown RBP6.76□□□□□ -1.33
PHGDH-225ENST00000641720 RETREG3Q86VR2 466 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 SNX32Q86XE0 403 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 TREML1Q86YW5 311 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 MSRB3Q8IXL7 192 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 PRR22Q8IZ63 422 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 EID3Q8N140 333 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 NATD1Q8N6N6 113 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 NUP43Q8NFH3 380 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 SFXN5Q8TD22 340 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 GTF2H4Q92759 462 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 SPDL1Q96EA4 605 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 RMND5BQ96G75 393 aaPredicted RBP6.76□□□□□ -1.33
PHGDH-225ENST00000641720 AURKBQ96GD4 344 aaPredicted RBP6.76□□□□□ -1.33
PHGDH-225ENST00000641720 C16orf58Q96GQ5 468 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 PAIP1Q9H074 479 aaKnown RBP6.76□□□□□ -1.33
PHGDH-225ENST00000641720 MYLK2Q9H1R3 596 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.76□□□□□ -1.33
PHGDH-225ENST00000641720 GPATCH2Q9NW75 528 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 TAS2R9Q9NYW1 312 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 BTNL2Q9UIR0 455 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 GPR55Q9Y2T6 319 aaPredicted RBP6.76□□□□□ -1.33
PHGDH-225ENST00000641720 CAPN7Q9Y6W3 813 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 PRKDCP78527 4128 aaKnown RBP6.76□□□□□ -1.33
PHGDH-225ENST00000641720 PKD1L1Q8TDX9 2849 aa6.76□□□□□ -1.33
PHGDH-225ENST00000641720 DYSFO75923 2080 aa6.75□□□□□ -1.33
PHGDH-225ENST00000641720 TRBV5-3A0A0A0MS03 114 aa6.75□□□□□ -1.33
PHGDH-225ENST00000641720 GXYLT2A0PJZ3 443 aa6.75□□□□□ -1.33
PHGDH-225ENST00000641720 FRG2CA6NGY1 282 aa6.75□□□□□ -1.33
PHGDH-225ENST00000641720 CCDC154A6NI56 674 aa6.75□□□□□ -1.33
PHGDH-225ENST00000641720 INAFM1C9JVW0 142 aa6.75□□□□□ -1.33
PHGDH-225ENST00000641720 FBP2O00757 339 aa6.75□□□□□ -1.33
PHGDH-225ENST00000641720 RFXANKO14593 260 aa6.75□□□□□ -1.33
PHGDH-225ENST00000641720 ERN1O75460 977 aaKnown RBP6.75□□□□□ -1.33
PHGDH-225ENST00000641720 FAM107AO95990 144 aa6.75□□□□□ -1.33
PHGDH-225ENST00000641720 IGKV1D-16P01601 117 aa6.75□□□□□ -1.33
PHGDH-225ENST00000641720 HMGN2P05204 90 aaKnown RBP6.75□□□□□ -1.33
PHGDH-225ENST00000641720 ACVR2AP27037 513 aa6.75□□□□□ -1.33
PHGDH-225ENST00000641720 MAP3K8P41279 467 aa6.75□□□□□ -1.33
PHGDH-225ENST00000641720 PPICP45877 212 aa6.75□□□□□ -1.33
PHGDH-225ENST00000641720 CCT3P49368 545 aaKnown RBP6.75□□□□□ -1.33
PHGDH-225ENST00000641720 MAN2A2P49641 1150 aa6.75□□□□□ -1.33
PHGDH-225ENST00000641720 SSR4P51571 173 aa6.75□□□□□ -1.33
PHGDH-225ENST00000641720 PRKAG1P54619 331 aa6.75□□□□□ -1.33
PHGDH-225ENST00000641720 CASP9P55211 416 aa6.75□□□□□ -1.33
PHGDH-225ENST00000641720 IRX1P78414 480 aaPredicted RBP6.75□□□□□ -1.33
PHGDH-225ENST00000641720 PRR5P85299 388 aa6.75□□□□□ -1.33
PHGDH-225ENST00000641720 PSG6Q00889 435 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms