RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 SRPK3Q9UPE1 567 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 PCDHGB1Q9Y5G3 927 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 NPIPA5A0A0B4J1W7 369 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 A0A1W2PQM1 296 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 NPIPA7E9PJI5 369 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 HYAL3O43820 417 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-208ENST00000641023 NPIPA8P0DM63 369 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 PAX7P23759 505 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 ALDH6A1Q02252 535 aaKnown RBP16.03■□□□□ 0.16
PHGDH-208ENST00000641023 ARHGAP40Q5TG30 622 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 TMEM236Q5W0B7 351 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 TMPRSS9Q7Z410 1059 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 ARHGAP22Q7Z5H3 698 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 ZNF615Q8N8J6 731 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 TMEM105Q8N8V8 129 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 DTWD2Q8NBA8 298 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 SLC41A3Q96GZ6 507 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 PLCXD1Q9NUJ7 323 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 DTX4Q9Y2E6 619 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 RGS10O43665 173 aa16.02■□□□□ 0.15
PHGDH-208ENST00000641023 SOX14O95416 240 aa16.02■□□□□ 0.15
PHGDH-208ENST00000641023 ZNF136P52737 540 aa16.02■□□□□ 0.15
PHGDH-208ENST00000641023 SH3BGRP55822 239 aaPredicted RBP16.02■□□□□ 0.15
PHGDH-208ENST00000641023 CCL7P80098 99 aa16.02■□□□□ 0.15
PHGDH-208ENST00000641023 TUBA3CQ13748 450 aa16.02■□□□□ 0.15
PHGDH-208ENST00000641023 TRIM61Q5EBN2 209 aa16.02■□□□□ 0.15
PHGDH-208ENST00000641023 B3GNT6Q6ZMB0 384 aa16.02■□□□□ 0.15
PHGDH-208ENST00000641023 NLGN4XQ8N0W4 816 aa16.02■□□□□ 0.15
PHGDH-208ENST00000641023 RCBTB1Q8NDN9 531 aa16.02■□□□□ 0.15
PHGDH-208ENST00000641023 OR4N2Q8NGD1 307 aa16.02■□□□□ 0.15
PHGDH-208ENST00000641023 ACOT11Q8WXI4 607 aaPredicted RBP16.02■□□□□ 0.15
PHGDH-208ENST00000641023 SENP5Q96HI0 755 aaPredicted RBP16.02■□□□□ 0.15
PHGDH-208ENST00000641023 LRRN3Q9H3W5 708 aa16.02■□□□□ 0.15
PHGDH-208ENST00000641023 PNO1Q9NRX1 252 aaKnown RBP16.02■□□□□ 0.15
PHGDH-208ENST00000641023 ZNF226Q9NYT6 803 aa16.02■□□□□ 0.15
PHGDH-208ENST00000641023 OR10H1Q9Y4A9 318 aa16.02■□□□□ 0.15
PHGDH-208ENST00000641023 CLCA3PQ9Y6N3 262 aa16.02■□□□□ 0.15
PHGDH-208ENST00000641023 ZDBF2Q9HCK1 2354 aa16.02■□□□□ 0.15
PHGDH-208ENST00000641023 TMEM221A6NGB7 291 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 PATE3B3GLJ2 98 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 ZNF701M0R085 212 aaPredicted RBP16.01■□□□□ 0.15
PHGDH-208ENST00000641023 M0R296 226 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 CT45A8P0DMV1 189 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 CT45A9P0DMV2 189 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 GABRB1P18505 474 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 DECR1Q16698 335 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 CT45A2Q5DJT8 189 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 PTCHD4Q6ZW05 846 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 GDF7Q7Z4P5 450 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 ALDH16A1Q8IZ83 802 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 OR13F1Q8NGS4 319 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 PTPMT1Q8WUK0 201 aaPredicted RBP16.01■□□□□ 0.15
PHGDH-208ENST00000641023 IGKV3D-11A0A0A0MRZ8 115 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 ARHGAP33O14559 1287 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 FMO6PO60774 539 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 SYPP08247 313 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 EMX1Q04741 257 aaPredicted RBP16.01■□□□□ 0.15
PHGDH-208ENST00000641023 VWA2Q5GFL6 755 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 C1orf189Q5VU69 101 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 SLC23A3Q6PIS1 610 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 CASP12Q6UXS9 341 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 NPSR1Q6W5P4 371 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 ZAR1Q86SH2 424 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 CCDC103Q8IW40 242 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 TMEM151BQ8IW70 566 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 ZNF614Q8N883 585 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 ZNF420Q8TAQ5 688 aaPredicted RBP16.01■□□□□ 0.15
PHGDH-208ENST00000641023 GNPDA2Q8TDQ7 276 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 TRUB1Q8WWH5 349 aaKnown RBP16.01■□□□□ 0.15
PHGDH-208ENST00000641023 MKKSQ9NPJ1 570 aaPredicted RBP16.01■□□□□ 0.15
PHGDH-208ENST00000641023 PTTG2Q9NZH5 202 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 ERVK-18Q9QC07 812 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 CBLCQ9ULV8 474 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 CFL2Q9Y281 166 aa16.01■□□□□ 0.15
PHGDH-208ENST00000641023 TRAPPC13A5PLN9 417 aa16■□□□□ 0.15
PHGDH-208ENST00000641023 SEC14L2O76054 403 aa16■□□□□ 0.15
PHGDH-208ENST00000641023 ITIH1P19827 911 aa16■□□□□ 0.15
PHGDH-208ENST00000641023 DRD5P21918 477 aa16■□□□□ 0.15
PHGDH-208ENST00000641023 LSM11P83369 360 aaKnown RBP eCLIP16■□□□□ 0.15
PHGDH-208ENST00000641023 DAB2P98082 770 aa16■□□□□ 0.15
PHGDH-208ENST00000641023 ZSWIM7Q19AV6 140 aa16■□□□□ 0.15
PHGDH-208ENST00000641023 PDZK1Q5T2W1 519 aa16■□□□□ 0.15
PHGDH-208ENST00000641023 SLX4IPQ5VYV7 408 aa16■□□□□ 0.15
PHGDH-208ENST00000641023 RHBDD2Q6NTF9 364 aa16■□□□□ 0.15
PHGDH-208ENST00000641023 AHSA2Q719I0 299 aa16■□□□□ 0.15
PHGDH-208ENST00000641023 PRSS48Q7RTY5 328 aa16■□□□□ 0.15
PHGDH-208ENST00000641023 NKAIN4Q8IVV8 208 aa16■□□□□ 0.15
PHGDH-208ENST00000641023 SVOPQ8N4V2 548 aa16■□□□□ 0.15
PHGDH-208ENST00000641023 PIGXQ8TBF5 258 aa16■□□□□ 0.15
PHGDH-208ENST00000641023 ITPAQ9BY32 194 aa16■□□□□ 0.15
PHGDH-208ENST00000641023 SYNDIG1Q9H7V2 258 aa16■□□□□ 0.15
PHGDH-208ENST00000641023 KRCC1Q9NPI7 259 aaPredicted RBP16■□□□□ 0.15
PHGDH-208ENST00000641023 TESQ9UGI8 421 aaKnown RBP16■□□□□ 0.15
PHGDH-208ENST00000641023 SLC7A7Q9UM01 511 aa16■□□□□ 0.15
PHGDH-208ENST00000641023 NTNG1Q9Y2I2 539 aa16■□□□□ 0.15
PHGDH-208ENST00000641023 IGHV5-10-1A0A0J9YXX1 117 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 SH3D21A4FU49 640 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 CLCA1A8K7I4 914 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 IGKV1D-16P01601 117 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 GKN3PP0CG01 181 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms