RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 HMBOX1Q6NT76 420 aa16.52■□□□□ 0.23
SCARB2-223ENST00000640640 ANKRD54Q6NXT1 300 aa16.52■□□□□ 0.23
SCARB2-223ENST00000640640 BPIFA2Q96DR5 249 aa16.52■□□□□ 0.23
SCARB2-223ENST00000640640 TMEM41AQ96HV5 264 aa16.52■□□□□ 0.23
SCARB2-223ENST00000640640 ZNF69Q9UC07 566 aa16.52■□□□□ 0.23
SCARB2-223ENST00000640640 GATBO75879 557 aaKnown RBP16.51■□□□□ 0.23
SCARB2-223ENST00000640640 CHMP24386 653 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 PHC1P78364 1004 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 REEP5Q00765 189 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 FBXO42Q6P3S6 717 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 ASCC3Q8N3C0 2202 aaKnown RBP16.51■□□□□ 0.23
SCARB2-223ENST00000640640 A0A1W2PQL4 384 aaPredicted RBP16.51■□□□□ 0.23
SCARB2-223ENST00000640640 C5orf51A6NDU8 294 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 MAOBP27338 520 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 SWI5Q1ZZU3 235 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 ENTPD8Q5MY95 495 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 COX20Q5RI15 118 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 TCEAL6Q6IPX3 200 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 ZNF283Q8N7M2 679 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 ACOT12Q8WYK0 555 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 TRIM43Q96BQ3 446 aaPredicted RBP16.51■□□□□ 0.23
SCARB2-223ENST00000640640 ALG8Q9BVK2 526 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 B3GAT2Q9NPZ5 323 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 MED11Q9P086 117 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 KLHL21Q9UJP4 597 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 VAMP1P23763 118 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 CD6P30203 668 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 CD97P48960 835 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 CSNK1G2P78368 415 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 FCRLBQ6BAA4 426 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 C16orf58Q96GQ5 468 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 MSLNLQ96KJ4 702 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 PLAC1Q9HBJ0 212 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 FTSJ1Q9UET6 329 aa16.51■□□□□ 0.23
SCARB2-223ENST00000640640 CDK4P11802 303 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 SLC6A12P48065 614 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 RGS6P49758 472 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 TBRG1Q3YBR2 411 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 PRAMEF17Q5VTA0 474 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 FAM69BQ5VUD6 431 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 METRNLQ641Q3 311 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 ZNF784Q8NCA9 323 aaPredicted RBP16.5■□□□□ 0.23
SCARB2-223ENST00000640640 SLC22A8Q8TCC7 542 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 TM4SF18Q96CE8 201 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 ZMYND19Q96E35 227 aaPredicted RBP16.5■□□□□ 0.23
SCARB2-223ENST00000640640 NAA50Q9GZZ1 169 aaKnown RBP16.5■□□□□ 0.23
SCARB2-223ENST00000640640 NUP214P35658 2090 aaPredicted RBP16.5■□□□□ 0.23
SCARB2-223ENST00000640640 COL4A5P29400 1685 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 CD40LGP29965 261 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 SCRN3Q0VDG4 424 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 RAB40BQ12829 278 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 FAM83HQ6ZRV2 1179 aaPredicted RBP16.5■□□□□ 0.23
SCARB2-223ENST00000640640 RASSF6Q6ZTQ3 369 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 SETD6Q8TBK2 473 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 OR52D1Q9H346 318 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 MCCC2Q9HCC0 563 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 UCKL1Q9NWZ5 548 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 PPT2Q9UMR5 302 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 HSPB11Q9Y547 144 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 TRBV5-4A0A0C4DH59 114 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 A8MV72 311 aaPredicted RBP16.5■□□□□ 0.23
SCARB2-223ENST00000640640 ZNF878C9JN71 531 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 CCR2P41597 374 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 ACY1Q03154 408 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 TMEM69Q5SWH9 247 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 C1orf94Q6P1W5 598 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 DIO2Q92813 273 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 GGHQ92820 318 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 TRBV4-1A0A0J9YWV2 114 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 RAB3BP20337 219 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 HOXC8P31273 242 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 CTHP32929 405 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 CA5AP35218 305 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 ADH7P40394 386 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 AP2S1P53680 142 aaPredicted RBP16.5■□□□□ 0.23
SCARB2-223ENST00000640640 PRPS1P60891 318 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 C18orf63Q68DL7 685 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 FAM71E1Q6IPT2 247 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 FCAMRQ8WWV6 532 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 NEURL3Q96EH8 262 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 QRSL1Q9H0R6 528 aaKnown RBP16.5■□□□□ 0.23
SCARB2-223ENST00000640640 IER3IP1Q9Y5U9 82 aa16.5■□□□□ 0.23
SCARB2-223ENST00000640640 RBBP9O75884 186 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 KCNJ10P78508 379 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 ZNF91Q05481 1191 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 LRIF1Q5T3J3 769 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 TMEFF1Q8IYR6 380 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 PRR22Q8IZ63 422 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 BMFQ96LC9 184 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 CCDC32Q9BV29 185 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 TRPV4Q9HBA0 871 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 DHDHQ9UQ10 334 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 FAM183AA6NL82 134 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 TSPAN12O95859 305 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 UGT2B7P16662 529 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 MAGEA8P43361 318 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 CYHR1Q6ZMK1 362 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 ZDHHC5Q9C0B5 715 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 GLIPR2Q9H4G4 154 aa16.49■□□□□ 0.23
SCARB2-223ENST00000640640 LOC100509620A0A075B734 347 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms