RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 CD8BP10966 210 aa16.61■□□□□ 0.25
CLN6-220ENST00000637450 CPA3P15088 417 aa16.61■□□□□ 0.25
CLN6-220ENST00000637450 UGT2B10P36537 528 aa16.61■□□□□ 0.25
CLN6-220ENST00000637450 FGFBP1Q14512 234 aa16.61■□□□□ 0.25
CLN6-220ENST00000637450 GRAMD1BQ3KR37 738 aa16.61■□□□□ 0.25
CLN6-220ENST00000637450 SHEQ5VZ18 495 aa16.61■□□□□ 0.25
CLN6-220ENST00000637450 CLEC6AQ6EIG7 209 aa16.61■□□□□ 0.25
CLN6-220ENST00000637450 Q6ZSR9 355 aa16.61■□□□□ 0.25
CLN6-220ENST00000637450 BIVMQ86UB2 503 aa16.61■□□□□ 0.25
CLN6-220ENST00000637450 PIK3R3Q92569 461 aa16.61■□□□□ 0.25
CLN6-220ENST00000637450 GFM2Q969S9 779 aaKnown RBP16.61■□□□□ 0.25
CLN6-220ENST00000637450 ZNF764Q96H86 408 aaPredicted RBP16.61■□□□□ 0.25
CLN6-220ENST00000637450 C18orf12Q96KH6 178 aa16.61■□□□□ 0.25
CLN6-220ENST00000637450 C12orf65Q9H3J6 166 aaKnown RBP16.61■□□□□ 0.25
CLN6-220ENST00000637450 LRTM1Q9HBL6 345 aa16.61■□□□□ 0.25
CLN6-220ENST00000637450 C1orf109Q9NX04 203 aa16.61■□□□□ 0.25
CLN6-220ENST00000637450 ZNF226Q9NYT6 803 aa16.61■□□□□ 0.25
CLN6-220ENST00000637450 C16orf97H3BN30 126 aa16.6■□□□□ 0.25
CLN6-220ENST00000637450 SLC28A1O00337 649 aa16.6■□□□□ 0.25
CLN6-220ENST00000637450 PDPK1O15530 556 aa16.6■□□□□ 0.25
CLN6-220ENST00000637450 RGS14O43566 566 aa16.6■□□□□ 0.25
CLN6-220ENST00000637450 TBX19O60806 448 aa16.6■□□□□ 0.25
CLN6-220ENST00000637450 NKX2-2O95096 273 aa16.6■□□□□ 0.25
CLN6-220ENST00000637450 SHBGP04278 402 aa16.6■□□□□ 0.25
CLN6-220ENST00000637450 POU2F1P14859 743 aa16.6■□□□□ 0.25
CLN6-220ENST00000637450 CRYGSP22914 178 aa16.6■□□□□ 0.25
CLN6-220ENST00000637450 CCKARP32238 428 aa16.6■□□□□ 0.25
CLN6-220ENST00000637450 RPS3AP61247 264 aaKnown RBP16.6■□□□□ 0.25
CLN6-220ENST00000637450 HSPB3Q12988 150 aa16.6■□□□□ 0.25
CLN6-220ENST00000637450 ANKRD26P1Q6NSI1 321 aa16.6■□□□□ 0.25
CLN6-220ENST00000637450 ZNF610Q8N9Z0 462 aa16.6■□□□□ 0.25
CLN6-220ENST00000637450 CEP70Q8NHQ1 597 aa16.6■□□□□ 0.25
CLN6-220ENST00000637450 GPR151Q8TDV0 419 aa16.6■□□□□ 0.25
CLN6-220ENST00000637450 CIDECQ96AQ7 238 aaPredicted RBP16.6■□□□□ 0.25
CLN6-220ENST00000637450 FCRL1Q96LA6 429 aa16.6■□□□□ 0.25
CLN6-220ENST00000637450 MED18Q9BUE0 208 aa16.6■□□□□ 0.25
CLN6-220ENST00000637450 EQTNQ9NQ60 294 aa16.6■□□□□ 0.25
CLN6-220ENST00000637450 NTMQ9P121 344 aa16.6■□□□□ 0.25
CLN6-220ENST00000637450 PTGDR2Q9Y5Y4 395 aa16.6■□□□□ 0.25
CLN6-220ENST00000637450 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 SHISA8B8ZZ34 492 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 ALG1L2C9J202 215 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 AQP8O94778 261 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 GPC1P35052 558 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 FRKP42685 505 aaPredicted RBP16.59■□□□□ 0.25
CLN6-220ENST00000637450 KCNJ5P48544 419 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 VPS26BQ4G0F5 336 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 LIPMQ5VYY2 423 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 RNF165Q6ZSG1 346 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 FAM214BQ7L5A3 538 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 GGNQ86UU5 652 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 EXOC3L1Q86VI1 746 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 TDRPQ86YL5 185 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 GSPT2Q8IYD1 628 aaKnown RBP16.59■□□□□ 0.25
CLN6-220ENST00000637450 CDRT4Q8N9R6 151 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 CCDC63Q8NA47 563 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 NUP43Q8NFH3 380 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 OR4C3Q8NH37 302 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 FAM110BQ8TC76 370 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 GIMAP5Q96F15 307 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 PIK3IP1Q96FE7 263 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 MARK4Q96L34 752 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 PIP5K1AQ99755 562 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 CCT7Q99832 543 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 SMR3AQ99954 134 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 IQCGQ9H095 443 aaKnown RBP16.59■□□□□ 0.25
CLN6-220ENST00000637450 REEP4Q9H6H4 257 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 STOML1Q9UBI4 398 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 PROCRQ9UNN8 238 aa16.59■□□□□ 0.25
CLN6-220ENST00000637450 COPEO14579 308 aa16.58■□□□□ 0.24
CLN6-220ENST00000637450 AZIN1O14977 448 aa16.58■□□□□ 0.24
CLN6-220ENST00000637450 AKAP10O43572 662 aa16.58■□□□□ 0.24
CLN6-220ENST00000637450 GMFGO60234 142 aa16.58■□□□□ 0.24
CLN6-220ENST00000637450 NGFRP08138 427 aa16.58■□□□□ 0.24
CLN6-220ENST00000637450 INHBBP09529 407 aa16.58■□□□□ 0.24
CLN6-220ENST00000637450 FCGR2AP12318 317 aa16.58■□□□□ 0.24
CLN6-220ENST00000637450 SDC1P18827 310 aa16.58■□□□□ 0.24
CLN6-220ENST00000637450 PRKAG1P54619 331 aa16.58■□□□□ 0.24
CLN6-220ENST00000637450 MANFP55145 182 aaKnown RBP16.58■□□□□ 0.24
CLN6-220ENST00000637450 SGCBQ16585 318 aa16.58■□□□□ 0.24
CLN6-220ENST00000637450 RFTN2Q52LD8 501 aaPredicted RBP16.58■□□□□ 0.24
CLN6-220ENST00000637450 ZNF385BQ569K4 471 aa16.58■□□□□ 0.24
CLN6-220ENST00000637450 C22orf34Q6ZV56 151 aa16.58■□□□□ 0.24
CLN6-220ENST00000637450 LRRC75A-AS1Q8N1F1 130 aa16.58■□□□□ 0.24
CLN6-220ENST00000637450 OR2T11Q8NH01 316 aa16.58■□□□□ 0.24
CLN6-220ENST00000637450 ZFP28Q8NHY6 868 aa16.58■□□□□ 0.24
CLN6-220ENST00000637450 PIGTQ969N2 578 aa16.58■□□□□ 0.24
CLN6-220ENST00000637450 PPCDCQ96CD2 204 aa16.58■□□□□ 0.24
CLN6-220ENST00000637450 ZBED6CLQ96FA7 236 aaPredicted RBP16.58■□□□□ 0.24
CLN6-220ENST00000637450 TUBB1Q9H4B7 451 aa16.58■□□□□ 0.24
CLN6-220ENST00000637450 PPCSQ9HAB8 311 aa16.58■□□□□ 0.24
CLN6-220ENST00000637450 HHATLQ9HCP6 504 aa16.58■□□□□ 0.24
CLN6-220ENST00000637450 PLSCR4Q9NRQ2 329 aa16.58■□□□□ 0.24
CLN6-220ENST00000637450 BAIAP2L1Q9UHR4 511 aa16.58■□□□□ 0.24
CLN6-220ENST00000637450 VDAC3Q9Y277 283 aa16.58■□□□□ 0.24
CLN6-220ENST00000637450 PCNX3Q9H6A9 2034 aa16.57■□□□□ 0.24
CLN6-220ENST00000637450 A0A087WZY1 265 aa16.57■□□□□ 0.24
CLN6-220ENST00000637450 EIF1AYO14602 144 aaKnown RBP16.57■□□□□ 0.24
CLN6-220ENST00000637450 ARHGEF9O43307 516 aa16.57■□□□□ 0.24
CLN6-220ENST00000637450 NDUFB5O43674 189 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms