RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 ZSWIM7Q19AV6 140 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 PGGHGQ32M88 737 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 PLK5Q496M5 336 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 TRMT12Q53H54 448 aaKnown RBP11.3□□□□□ -0.6
CLN8-212ENST00000637083 LIPKQ5VXJ0 399 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 NXNL2Q5VZ03 156 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 ZNF620Q6ZNG0 422 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 DGLUCYQ7Z3D6 616 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 WDR53Q7Z5U6 358 aaPredicted RBP11.3□□□□□ -0.6
CLN8-212ENST00000637083 CA13Q8N1Q1 262 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 PSD4Q8NDX1 1056 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 OR52L1Q8NGH7 329 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 OR8D4Q8NGM9 314 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 NELL2Q99435 816 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 COQ7Q99807 217 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 NEURL2Q9BR09 285 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 SMURF1Q9HCE7 757 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 SLC7A7Q9UM01 511 aa11.3□□□□□ -0.6
CLN8-212ENST00000637083 SPIN1Q9Y657 262 aaPredicted RBP11.3□□□□□ -0.6
CLN8-212ENST00000637083 IQCMA0A1B0GVH7 501 aa11.29□□□□□ -0.6
CLN8-212ENST00000637083 OR5K3A6NET4 321 aa11.29□□□□□ -0.6
CLN8-212ENST00000637083 CYR61O00622 381 aa11.29□□□□□ -0.6
CLN8-212ENST00000637083 FGF17O60258 216 aa11.29□□□□□ -0.6
CLN8-212ENST00000637083 GNSP15586 552 aa11.29□□□□□ -0.6
CLN8-212ENST00000637083 BMP7P18075 431 aa11.29□□□□□ -0.6
CLN8-212ENST00000637083 RPS19P39019 145 aaKnown RBP11.29□□□□□ -0.6
CLN8-212ENST00000637083 SHC2P98077 582 aa11.29□□□□□ -0.6
CLN8-212ENST00000637083 TFF2Q03403 129 aa11.29□□□□□ -0.6
CLN8-212ENST00000637083 PRICKLE4Q2TBC4 344 aa11.29□□□□□ -0.6
CLN8-212ENST00000637083 TMEM31Q5JXX7 168 aa11.29□□□□□ -0.6
CLN8-212ENST00000637083 ARMC4Q5T2S8 1044 aa11.29□□□□□ -0.6
CLN8-212ENST00000637083 SNX29P2Q8IUI4 249 aa11.29□□□□□ -0.6
CLN8-212ENST00000637083 GID4Q8IVV7 300 aa11.29□□□□□ -0.6
CLN8-212ENST00000637083 POGLUT1Q8NBL1 392 aa11.29□□□□□ -0.6
CLN8-212ENST00000637083 GPR151Q8TDV0 419 aa11.29□□□□□ -0.6
CLN8-212ENST00000637083 SLC37A2Q8TED4 501 aa11.29□□□□□ -0.6
CLN8-212ENST00000637083 HS6ST2Q96MM7 605 aa11.29□□□□□ -0.6
CLN8-212ENST00000637083 KCTD7Q96MP8 289 aa11.29□□□□□ -0.6
CLN8-212ENST00000637083 FN3KQ9H479 309 aa11.29□□□□□ -0.6
CLN8-212ENST00000637083 TRAPPC4Q9Y296 219 aa11.29□□□□□ -0.6
CLN8-212ENST00000637083 NINQ8N4C6 2090 aa11.29□□□□□ -0.6
CLN8-212ENST00000637083 SPTY2D1-AS1A0A0U1RR47 76 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 ZNF860A6NHJ4 632 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 UNC119BA6NIH7 251 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 C10orf142B7Z368 130 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 BOLA2-SMG1P6H3BVE0 249 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 NARSO43776 548 aaKnown RBP11.28□□□□□ -0.6
CLN8-212ENST00000637083 LDB3O75112 727 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 RCBTB2O95199 551 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 SLC35E2P0CK97 266 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 ATP6V1E1P36543 226 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 GPR4P46093 362 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 ZNHIT3Q15649 155 aaPredicted RBP11.28□□□□□ -0.6
CLN8-212ENST00000637083 CLEC12AQ5QGZ9 265 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 AADACL4Q5VUY2 407 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 STEAP3Q658P3 488 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 KLHL36Q8N4N3 616 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 SMRP1Q8NCR6 262 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 BRIX1Q8TDN6 353 aaKnown RBP11.28□□□□□ -0.6
CLN8-212ENST00000637083 ADAMTS18Q8TE60 1221 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 TMEM255BQ8WV15 326 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 AP3S1Q92572 193 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 WDFY2Q96P53 400 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 CD180Q99467 661 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 KCNS3Q9BQ31 491 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 ZNF559Q9BR84 538 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 MED18Q9BUE0 208 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 KLHL25Q9H0H3 589 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 SEMA6CQ9H3T2 930 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 TMEM27Q9HBJ8 222 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 TXNL4BQ9NX01 149 aaKnown RBP11.28□□□□□ -0.6
CLN8-212ENST00000637083 MAT2BQ9NZL9 334 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 MRPS33Q9Y291 106 aaKnown RBP11.28□□□□□ -0.6
CLN8-212ENST00000637083 EXOGQ9Y2C4 368 aaKnown RBP11.28□□□□□ -0.6
CLN8-212ENST00000637083 BRWD1Q9NSI6 2320 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 RGS5O15539 181 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 AKAP8O43823 692 aaKnown RBP11.28□□□□□ -0.6
CLN8-212ENST00000637083 IGHV4-34P06331 123 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 THEGLP0DJG4 465 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 PVRP15151 417 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 HTR1FP30939 366 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 GABRA5P31644 462 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 ZNF136P52737 540 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 GAS1P54826 345 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 VSX2P58304 361 aaPredicted RBP11.28□□□□□ -0.6
CLN8-212ENST00000637083 HHEXQ03014 270 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 ACSM1Q08AH1 577 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 MAP4K2Q12851 820 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 CCINQ13939 588 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 OR1Q1Q15612 314 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 MRPL2Q5T653 305 aaKnown RBP11.28□□□□□ -0.6
CLN8-212ENST00000637083 SLC30A6Q6NXT4 461 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 PAQR6Q6TCH4 344 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 HSDL2Q6YN16 418 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 TMPRSS11AQ6ZMR5 421 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 SLC44A3Q8N4M1 653 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 SETD6Q8TBK2 473 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 TMEM239Q8WW34 195 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 SLC25A46Q96AG3 418 aa11.28□□□□□ -0.6
CLN8-212ENST00000637083 TMCO6Q96DC7 493 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms