RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 SLC2A7Q6PXP3 512 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 CYP20A1Q6UW02 462 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 NDUFAF7Q7L592 441 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 ZNF808Q8N4W9 903 aaPredicted RBP4.49□□□□□ -1.69
LINC00550-201ENST00000629293 FAM47BQ8NA70 645 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 FNDC5Q8NAU1 212 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 OR8J3Q8NGG0 315 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 ZCCHC10Q8TBK6 192 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 CA5BP1Q8WTZ4 195 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 RERGQ96A58 199 aaPredicted RBP4.49□□□□□ -1.69
LINC00550-201ENST00000629293 PPWD1Q96BP3 646 aaKnown RBP4.49□□□□□ -1.69
LINC00550-201ENST00000629293 NMD3Q96D46 503 aaKnown RBP4.49□□□□□ -1.69
LINC00550-201ENST00000629293 RMND5BQ96G75 393 aaPredicted RBP4.49□□□□□ -1.69
LINC00550-201ENST00000629293 CLK4Q9HAZ1 481 aaKnown RBP4.49□□□□□ -1.69
LINC00550-201ENST00000629293 TAC3Q9UHF0 121 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 OAZ3Q9UMX2 235 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 AURKCQ9UQB9 309 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 PDLIM1O00151 329 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 UPK1AO00322 258 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 WDR47O94967 919 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 CRYABP02511 175 aaKnown RBP4.49□□□□□ -1.69
LINC00550-201ENST00000629293 SERPIND1P05546 499 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 COX6A1P12074 109 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 CDH1P12830 882 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 NCK1P16333 377 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 TACR1P25103 407 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 SMSP52788 366 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 MERTKQ12866 999 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 SELPLGQ14242 412 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 ABRAXAS2Q15018 415 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 PHKG1Q16816 387 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 CYP51A1Q16850 503 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 FRA10AC1Q70Z53 315 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 GALNTL5Q7Z4T8 443 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 SLC22A15Q8IZD6 547 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 TNIP2Q8NFZ5 429 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 OR2L3Q8NG85 312 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 OR9A4Q8NGU2 314 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 OR2L8Q8NGY9 312 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 PSMF1Q92530 271 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 RHBDF1Q96CC6 855 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 CGREF1Q99674 301 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 MRPS30Q9NP92 439 aaKnown RBP4.49□□□□□ -1.69
LINC00550-201ENST00000629293 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.49□□□□□ -1.69
LINC00550-201ENST00000629293 TRPS1Q9UHF7 1281 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 MAGEL2Q9UJ55 1249 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 CDC14AQ9UNH5 594 aa4.49□□□□□ -1.69
LINC00550-201ENST00000629293 RUVBL1Q9Y265 456 aaKnown RBP4.49□□□□□ -1.69
LINC00550-201ENST00000629293 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.49□□□□□ -1.69
LINC00550-201ENST00000629293 PCM1Q15154 2024 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 TRBV5-3A0A0A0MS03 114 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 OR5H15A6NDH6 313 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 EI24O14681 340 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 SLC16A5O15375 505 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 PRICKLE3O43900 615 aaPredicted RBP4.48□□□□□ -1.69
LINC00550-201ENST00000629293 PDE9AO76083 593 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 C8orf89P0DMQ9 161 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 HOXB9P17482 250 aaPredicted RBP4.48□□□□□ -1.69
LINC00550-201ENST00000629293 GGT1P19440 569 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 CALRP27797 417 aaKnown RBP4.48□□□□□ -1.69
LINC00550-201ENST00000629293 PCSK6P29122 969 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 CMPK1P30085 196 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 CA7P43166 264 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 CDK9P50750 372 aaKnown RBP4.48□□□□□ -1.69
LINC00550-201ENST00000629293 TDGF1P3P51864 188 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 ZNF658BQ4V348 819 aaPredicted RBP4.48□□□□□ -1.69
LINC00550-201ENST00000629293 RFTN2Q52LD8 501 aaPredicted RBP4.48□□□□□ -1.69
LINC00550-201ENST00000629293 CYBRD1Q53TN4 286 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 SULT1C3Q6IMI6 304 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 KRT80Q6KB66 452 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 MEX3BQ6ZN04 569 aaKnown RBP4.48□□□□□ -1.69
LINC00550-201ENST00000629293 TMEM200AQ86VY9 491 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 LIX1LQ8IVB5 337 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 BEST3Q8N1M1 668 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 OR52E4Q8NGH9 312 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 METTL6Q8TCB7 284 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 NRGNQ92686 78 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 PPP3R2Q96LZ3 170 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 C10orf90Q96M02 699 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 LMF1Q96S06 567 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 NTMT1Q9BV86 223 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 NTN4Q9HB63 628 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 PLA2G2DQ9UNK4 145 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 POLR3HQ9Y535 204 aaPredicted RBP4.48□□□□□ -1.69
LINC00550-201ENST00000629293 AKAP9Q99996 3911 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 H3BSA7 217 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 ZNF701M0R085 212 aaPredicted RBP4.48□□□□□ -1.69
LINC00550-201ENST00000629293 PCDH17O14917 1159 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 SRPX2O60687 465 aaPredicted RBP4.48□□□□□ -1.69
LINC00550-201ENST00000629293 PRAMEF2O60811 474 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 TPOP07202 933 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 EPORP19235 508 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 CAPGP40121 348 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 RGS4P49798 205 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 ADARB1P78563 741 aaKnown RBP4.48□□□□□ -1.69
LINC00550-201ENST00000629293 FOXO1Q12778 655 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 ZNF630Q2M218 657 aaPredicted RBP4.48□□□□□ -1.69
LINC00550-201ENST00000629293 AP5B1Q2VPB7 878 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 CDKL4Q5MAI5 379 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 CD276Q5ZPR3 534 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms