RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 OR56A1Q8NGH5 318 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 OR4C3Q8NH37 302 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 RAB3IL1Q8TBN0 382 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 ZNF75CPQ92670 426 aaPredicted RBP12.9□□□□□ -0.34
PNKP-223ENST00000629179 CDS1Q92903 461 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 ATP6V1G3Q96LB4 118 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 ACTRT3Q9BYD9 372 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 TBL1XR1Q9BZK7 514 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 SDHAF3Q9NRP4 125 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 GPATCH2Q9NW75 528 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 RPH3AQ9Y2J0 694 aaPredicted RBP12.9□□□□□ -0.34
PNKP-223ENST00000629179 KCNE3Q9Y6H6 103 aa12.9□□□□□ -0.34
PNKP-223ENST00000629179 TRPC5OSA6NMA1 111 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 SCN2BO60939 215 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 TOXO94900 526 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 CPSF4O95639 269 aaKnown RBP12.89□□□□□ -0.35
PNKP-223ENST00000629179 OXSR1O95747 527 aaPredicted RBP12.89□□□□□ -0.35
PNKP-223ENST00000629179 ANGPTL1O95841 491 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 ACTL6AO96019 429 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 PRF1P14222 555 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 PTGER4P35408 488 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 GCKP35557 465 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 SOAT1P35610 550 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 ZFP36L2P47974 494 aaKnown RBP12.89□□□□□ -0.35
PNKP-223ENST00000629179 GFRA1P56159 465 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 DSCR4P56555 118 aaPredicted RBP12.89□□□□□ -0.35
PNKP-223ENST00000629179 UFM1P61960 85 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 POU6F2P78424 691 aaPredicted RBP12.89□□□□□ -0.35
PNKP-223ENST00000629179 SRYQ05066 204 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 CDC73Q6P1J9 531 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 ANKRD46Q86W74 232 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 LIX1LQ8IVB5 337 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 LRRC34Q8IZ02 419 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 CLEC4FQ8N1N0 589 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 OR8J2Q8NGG1 315 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 SFXN5Q8TD22 340 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 ADAMTS15Q8TE58 950 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 TEX37Q96LM6 180 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 SFXN2Q96NB2 322 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 STACQ99469 402 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 BTBD2Q9BX70 525 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 PIGUQ9H490 435 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 NEUROD4Q9HD90 331 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 DUSP22Q9NRW4 184 aa12.89□□□□□ -0.35
PNKP-223ENST00000629179 FAF1Q9UNN5 650 aaPredicted RBP12.89□□□□□ -0.35
PNKP-223ENST00000629179 MRPS18CQ9Y3D5 142 aaKnown RBP12.89□□□□□ -0.35
PNKP-223ENST00000629179 C9JVG2 144 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 RNASET2O00584 256 aaKnown RBP12.88□□□□□ -0.35
PNKP-223ENST00000629179 GMFGO60234 142 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 COX6B1P14854 86 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 CPN1P15169 458 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 H2AFXP16104 143 aaPredicted RBP12.88□□□□□ -0.35
PNKP-223ENST00000629179 HK1P19367 917 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 TBXA2RP21731 343 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 CLNS1AP54105 237 aaKnown RBP12.88□□□□□ -0.35
PNKP-223ENST00000629179 B3GALT5-AS1P59052 145 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.88□□□□□ -0.35
PNKP-223ENST00000629179 SLC9B1Q4ZJI4 515 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 SPANXN4Q5MJ08 99 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 RIPPLY2Q5TAB7 128 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 NXNQ6DKJ4 435 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 ENPP6Q6UWR7 440 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 HDXQ7Z353 690 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 SPATA19Q7Z5L4 167 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 GATSQ8NAP1 163 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 TNIP2Q8NFZ5 429 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 OR4A15Q8NGL6 344 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 TESCQ96BS2 214 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 MOAP1Q96BY2 351 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 DTNBP1Q96EV8 351 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 OR7D2Q96RA2 312 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 TRIB1Q96RU8 372 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 KCNJ16Q9NPI9 418 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 AIG1Q9NVV5 245 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 GIN1Q9NXP7 522 aa12.88□□□□□ -0.35
PNKP-223ENST00000629179 APCP25054 2843 aa12.87□□□□□ -0.35
PNKP-223ENST00000629179 NPIPA5A0A0B4J1W7 369 aa12.87□□□□□ -0.35
PNKP-223ENST00000629179 PRSS51A0A1B0GVH4 220 aa12.87□□□□□ -0.35
PNKP-223ENST00000629179 ALG1L2C9J202 215 aa12.87□□□□□ -0.35
PNKP-223ENST00000629179 NPIPA7E9PJI5 369 aa12.87□□□□□ -0.35
PNKP-223ENST00000629179 SLCO1B7G3V0H7 640 aa12.87□□□□□ -0.35
PNKP-223ENST00000629179 KLF11O14901 512 aa12.87□□□□□ -0.35
PNKP-223ENST00000629179 NDUFB5O43674 189 aa12.87□□□□□ -0.35
PNKP-223ENST00000629179 NGFRP08138 427 aa12.87□□□□□ -0.35
PNKP-223ENST00000629179 NPIPA8P0DM63 369 aa12.87□□□□□ -0.35
PNKP-223ENST00000629179 IL12AP29459 219 aa12.87□□□□□ -0.35
PNKP-223ENST00000629179 CEACAM8P31997 349 aaPredicted RBP12.87□□□□□ -0.35
PNKP-223ENST00000629179 LHX2P50458 406 aa12.87□□□□□ -0.35
PNKP-223ENST00000629179 DGKQP52824 942 aa12.87□□□□□ -0.35
PNKP-223ENST00000629179 CASP9P55211 416 aa12.87□□□□□ -0.35
PNKP-223ENST00000629179 RPS26P62854 115 aaKnown RBP12.87□□□□□ -0.35
PNKP-223ENST00000629179 C17orf67Q0P5P2 114 aa12.87□□□□□ -0.35
PNKP-223ENST00000629179 SF3B4Q15427 424 aaKnown RBP eCLIP12.87□□□□□ -0.356e-8■■■■■ 27.3
PNKP-223ENST00000629179 FAM174BQ3ZCQ3 159 aa12.87□□□□□ -0.35
PNKP-223ENST00000629179 ANXA8L1Q5VT79 327 aa12.87□□□□□ -0.35
PNKP-223ENST00000629179 NSUN5P2Q63ZY6 315 aa12.87□□□□□ -0.35
PNKP-223ENST00000629179 PLXDC2Q6UX71 529 aa12.87□□□□□ -0.35
PNKP-223ENST00000629179 MAVSQ7Z434 540 aa12.87□□□□□ -0.35
PNKP-223ENST00000629179 C6orf120Q7Z4R8 191 aa12.87□□□□□ -0.35
PNKP-223ENST00000629179 LACC1Q8IV20 430 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms