RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 ZNF141Q15928 474 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 LRRC36Q1X8D7 754 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 GRAMD1BQ3KR37 738 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 RNF220Q5VTB9 566 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 FAM69BQ5VUD6 431 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 PLAG1Q6DJT9 500 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 KIRREL2Q6UWL6 708 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 NDUFAF7Q7L592 441 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 CARM1Q86X55 608 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 SVOPLQ8N434 492 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 OR11G2Q8NGC1 345 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 ELP5Q8TE02 316 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 DIO2Q92813 273 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 IMMP1LQ96LU5 166 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 C9orf16Q9BUW7 83 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 AMBRA1Q9C0C7 1298 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 FAM192AQ9GZU8 254 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 RYDENQ9NUL5 291 aaKnown RBP13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 TRBV11-1A0A0K0K1C0 115 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 NPIPB9F8W1W9 429 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 SOCS6O14544 535 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 DNAJB5O75953 348 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 EPPINO95925 133 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 ICAM2P13598 275 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 TNFRSF1BP20333 461 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 KRT20P35900 424 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 DCTP40126 519 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 ARHGDIAP52565 204 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 EEF1A1P68104 462 aaKnown RBP13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 MAPK14Q16539 360 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 NRF1Q16656 503 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 BTBD16Q32M84 506 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 ZBTB49Q6ZSB9 765 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 TSEN54Q7Z6J9 526 aaKnown RBP13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 ZAR1Q86SH2 424 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 CYP4Z1Q86W10 505 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 DTX1Q86Y01 620 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 ZDHHC13Q8IUH4 622 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 CMIPQ8IY22 773 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 SLC34A3Q8N130 599 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 PACRGLQ8N7B6 248 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 TMBIM1Q969X1 311 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 NRBF2Q96F24 287 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 NR1H4Q96RI1 486 aaPredicted RBP13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 ARHGDIGQ99819 225 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 CIB1Q99828 191 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 UBQLN4Q9NRR5 601 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 KCNE5Q9UJ90 142 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 OAZ3Q9UMX2 235 aa13.13□□□□□ -0.31
CLTCL1-212ENST00000622493 CNOT1A5YKK6 2376 aaKnown RBP13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 PTPRZ1P23471 2315 aaPredicted RBP13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 NSG1A0A0A6YYJ2 146 aa13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 PEX12O00623 359 aa13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 ZNF23P17027 643 aa13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 PNLIPRP2P54317 469 aa13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 ZNF836Q6ZNA1 936 aa13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 PPP1R32Q7Z5V6 425 aa13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 MARCH9Q86YJ5 346 aa13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 TAGAPQ8N103 731 aa13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 ZNF527Q8NB42 609 aa13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 OR5K1Q8NHB7 308 aa13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 NR4A3Q92570 626 aa13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 NKD1Q969G9 470 aa13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 SLC35B4Q969S0 331 aa13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 SDCCAG3Q96C92 435 aa13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 PIP5K1AQ99755 562 aa13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 OSBPL10Q9BXB5 764 aa13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 REEP1Q9H902 201 aa13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 MMP25Q9NPA2 562 aa13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 ASCL3Q9NQ33 180 aa13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 CHST2Q9Y4C5 530 aa13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 DTNAQ9Y4J8 743 aa13.12□□□□□ -0.31
CLTCL1-212ENST00000622493 CDHR4A6H8M9 788 aa13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 G3V2T6 193 aa13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 H0YJX3 145 aa13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 ABCB7O75027 752 aa13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 E2F6O75461 281 aa13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 ZNF26P17031 533 aaPredicted RBP13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 NAGAP17050 411 aa13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 ABCD3P28288 659 aa13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 IL12BP29460 328 aa13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 DNAJA1P31689 397 aaKnown RBP13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 RPS18P62269 152 aaKnown RBP13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 PLCXD2Q0VAA5 305 aa13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 DYNC1I2Q13409 638 aaKnown RBP13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 RSPO4Q2I0M5 234 aaPredicted RBP13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 PPP4R4Q6NUP7 873 aa13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 TCTN3Q6NUS6 607 aa13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 HMGN2P46Q86SG4 172 aa13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 HIPK1Q86Z02 1210 aa13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 GRAMD2AQ8IUY3 354 aa13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 CLIP4Q8N3C7 705 aa13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 IL22RA1Q8N6P7 574 aa13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 OR6T1Q8NGN1 323 aa13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 EFHD2Q96C19 240 aaPredicted RBP13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 IP6K3Q96PC2 410 aa13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 EPYCQ99645 322 aa13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 DEFB126Q9BYW3 111 aa13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 COQ10BQ9H8M1 238 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms