RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 ANXA13P27216 316 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 CCND3P30281 292 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-229ENST00000621897 RPL9P32969 192 aaKnown RBP3.17□□□□□ -1.9
BRCA1-229ENST00000621897 HTR2BP41595 481 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 HAAOP46952 286 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 CEBPDP49716 269 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-229ENST00000621897 TPM4P67936 248 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 RPP38P78345 283 aaKnown RBP3.17□□□□□ -1.9
BRCA1-229ENST00000621897 GALK2Q01415 458 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 PPP1R8Q12972 351 aaKnown RBP3.17□□□□□ -1.9
BRCA1-229ENST00000621897 TPD52L1Q16890 204 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-229ENST00000621897 GPAT3Q53EU6 434 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 MPPE1Q53F39 396 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 UTF1Q5T230 341 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 PIP5KL1Q5T9C9 394 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 CARD17Q5XLA6 110 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 NCR3LG1Q68D85 454 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 RFWD3Q6PCD5 774 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 PODNL1Q6PEZ8 512 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 DEGS2Q6QHC5 323 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 BZW1Q7L1Q6 419 aaKnown RBP3.17□□□□□ -1.9
BRCA1-229ENST00000621897 C12orf56Q8IXR9 622 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 SYCE1Q8N0S2 351 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 GPR137CQ8N3F9 429 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 COMMD1Q8N668 190 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 DNAAF3Q8N9W5 541 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 MINDY2Q8NBR6 621 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 STKLD1Q8NE28 680 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 TRPV1Q8NER1 839 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 SLC2A14Q8TDB8 520 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 DQX1Q8TE96 717 aaKnown RBP3.17□□□□□ -1.9
BRCA1-229ENST00000621897 SAP25Q8TEE9 199 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 PAQR8Q8TEZ7 354 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 UBLCP1Q8WVY7 318 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-229ENST00000621897 TSEN15Q8WW01 171 aaKnown RBP3.17□□□□□ -1.9
BRCA1-229ENST00000621897 OR1E3Q8WZA6 343 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 RIT1Q92963 219 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 SLC35C1Q96A29 364 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 SGK3Q96BR1 496 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 BPIFA2Q96DR5 249 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 SPAG8Q99932 426 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-229ENST00000621897 TRIM62Q9BVG3 475 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 NAPBQ9H115 298 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 PSTPIP2Q9H939 334 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 VAT1LQ9HCJ6 419 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 SDHAF3Q9NRP4 125 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 ANAPC11Q9NYG5 84 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 CNOT2Q9NZN8 540 aaKnown RBP3.17□□□□□ -1.9
BRCA1-229ENST00000621897 ATXN10Q9UBB4 475 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 FOXA2Q9Y261 457 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-229ENST00000621897 PFASO15067 1338 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 A0A1B0GUL7 405 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 ERICH2A1L162 156 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 MACROD2A1Z1Q3 448 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 FAM149AA5PLN7 773 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 RTL8CO15255 209 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 P2RX6O15547 441 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 ZNF264O43296 627 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 B4GAT1O43505 415 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 CSO75390 466 aaKnown RBP3.16□□□□□ -1.9
BRCA1-229ENST00000621897 RAD51DO75771 328 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 CBR3O75828 277 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 CAPN1P07384 714 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 FOSL2P15408 326 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 PRKACAP17612 351 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 TNNI3P19429 210 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 NCF2P19878 526 aaPredicted RBP3.16□□□□□ -1.9
BRCA1-229ENST00000621897 HTR2AP28223 471 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 AKT2P31751 481 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 SPRP35270 261 aaPredicted RBP3.16□□□□□ -1.9
BRCA1-229ENST00000621897 SLC1A3P43003 542 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 SYKP43405 635 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 CNN1P51911 297 aaKnown RBP3.16□□□□□ -1.9
BRCA1-229ENST00000621897 CLDN8P56748 225 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 PPIAP62937 165 aaKnown RBP3.16□□□□□ -1.9
BRCA1-229ENST00000621897 HSF2Q03933 536 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 ARHGAP1Q07960 439 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 NCF4Q15080 339 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 LTB4RQ15722 352 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 STXBP2Q15833 593 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 SSX2Q16385 188 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 PCK2Q16822 640 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 FAM83EQ2M2I3 478 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 TIMM50Q3ZCQ8 353 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 USH1GQ495M9 461 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 SLC22A6Q4U2R8 563 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 PHYHD1Q5SRE7 291 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 LRRC38Q5VT99 294 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 B3GLCTQ6Y288 498 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 ZNF600Q6ZNG1 722 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 NUFIP2Q7Z417 695 aaKnown RBP3.16□□□□□ -1.9
BRCA1-229ENST00000621897 TPRA1Q86W33 373 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 CDR2LQ86X02 465 aaPredicted RBP3.16□□□□□ -1.9
BRCA1-229ENST00000621897 MEX3DQ86XN8 651 aaKnown RBP3.16□□□□□ -1.9
BRCA1-229ENST00000621897 KLHDC8AQ8IYD2 350 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 BCORP1Q8N888 145 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 NECAB1Q8N987 351 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 FLVCR1-AS1Q8TAF5 88 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 MITD1Q8WV92 249 aa3.16□□□□□ -1.9
BRCA1-229ENST00000621897 ESAMQ96AP7 390 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms