RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 LINC00471Q8N535 108 aa19.86■□□□□ 0.77
SPAST-204ENST00000621856 BCORP1Q8N888 145 aa19.86■□□□□ 0.77
SPAST-204ENST00000621856 HDAC2Q92769 488 aaKnown RBP19.86■□□□□ 0.77
SPAST-204ENST00000621856 SEMA4GQ9NTN9 838 aa19.86■□□□□ 0.77
SPAST-204ENST00000621856 C14orf105Q9NVL8 296 aa19.86■□□□□ 0.77
SPAST-204ENST00000621856 NTNG1Q9Y2I2 539 aa19.86■□□□□ 0.77
SPAST-204ENST00000621856 HSPE1-MOB4S4R3N1 261 aa19.86■□□□□ 0.77
SPAST-204ENST00000621856 COL5A1P20908 1838 aaPredicted RBP19.85■□□□□ 0.77
SPAST-204ENST00000621856 IGLV3-12A0A075B6K2 115 aa19.85■□□□□ 0.77
SPAST-204ENST00000621856 POLR1CO15160 346 aaPredicted RBP19.85■□□□□ 0.77
SPAST-204ENST00000621856 HEXBP07686 556 aa19.85■□□□□ 0.77
SPAST-204ENST00000621856 C6orf141Q5SZD1 244 aa19.85■□□□□ 0.77
SPAST-204ENST00000621856 PDZK1Q5T2W1 519 aa19.85■□□□□ 0.77
SPAST-204ENST00000621856 AP1ARQ63HQ0 302 aa19.85■□□□□ 0.77
SPAST-204ENST00000621856 KLHL17Q6TDP4 642 aa19.85■□□□□ 0.77
SPAST-204ENST00000621856 PARP8Q8N3A8 854 aa19.85■□□□□ 0.77
SPAST-204ENST00000621856 ZNF721Q8TF20 911 aa19.85■□□□□ 0.77
SPAST-204ENST00000621856 DIO2Q92813 273 aa19.85■□□□□ 0.77
SPAST-204ENST00000621856 SLC38A4Q969I6 547 aa19.85■□□□□ 0.77
SPAST-204ENST00000621856 UCK2Q9BZX2 261 aa19.85■□□□□ 0.77
SPAST-204ENST00000621856 A0A087WXM4 84 aa19.85■□□□□ 0.77
SPAST-204ENST00000621856 CDHR4A6H8M9 788 aa19.85■□□□□ 0.77
SPAST-204ENST00000621856 IGKV3-11P04433 115 aa19.85■□□□□ 0.77
SPAST-204ENST00000621856 RPL5P46777 297 aaKnown RBP19.85■□□□□ 0.77
SPAST-204ENST00000621856 GSSP48637 474 aa19.85■□□□□ 0.77
SPAST-204ENST00000621856 TARDBPQ13148 414 aaKnown RBP eCLIP19.85■□□□□ 0.77
SPAST-204ENST00000621856 TOP3AQ13472 1001 aaPredicted RBP19.85■□□□□ 0.77
SPAST-204ENST00000621856 SF3A2Q15428 464 aaKnown RBP19.85■□□□□ 0.77
SPAST-204ENST00000621856 PGBD2Q6P3X8 592 aa19.85■□□□□ 0.77
SPAST-204ENST00000621856 Q6ZPB1 254 aaPredicted RBP19.85■□□□□ 0.77
SPAST-204ENST00000621856 LANCL3Q6ZV70 420 aa19.85■□□□□ 0.77
SPAST-204ENST00000621856 APLFQ8IW19 511 aaPredicted RBP19.85■□□□□ 0.77
SPAST-204ENST00000621856 OR4K5Q8NGD3 323 aa19.85■□□□□ 0.77
SPAST-204ENST00000621856 ADAMTS16Q8TE57 1224 aa19.85■□□□□ 0.77
SPAST-204ENST00000621856 HRASLS5Q96KN8 279 aa19.85■□□□□ 0.77
SPAST-204ENST00000621856 NUDT9Q9BW91 350 aa19.85■□□□□ 0.77
SPAST-204ENST00000621856 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.85■□□□□ 0.77
SPAST-204ENST00000621856 COPS7AQ9UBW8 275 aa19.85■□□□□ 0.77
SPAST-204ENST00000621856 PCDHGA10Q9Y5H3 936 aa19.85■□□□□ 0.77
SPAST-204ENST00000621856 OR5F1O95221 314 aa19.84■□□□□ 0.77
SPAST-204ENST00000621856 GKN3PP0CG01 181 aa19.84■□□□□ 0.77
SPAST-204ENST00000621856 PPICP45877 212 aa19.84■□□□□ 0.77
SPAST-204ENST00000621856 ZNF136P52737 540 aa19.84■□□□□ 0.77
SPAST-204ENST00000621856 PSMD4P55036 377 aaKnown RBP19.84■□□□□ 0.77
SPAST-204ENST00000621856 NUP107P57740 925 aa19.84■□□□□ 0.77
SPAST-204ENST00000621856 FOXL2P58012 376 aa19.84■□□□□ 0.77
SPAST-204ENST00000621856 OVCH1Q7RTY7 1134 aa19.84■□□□□ 0.77
SPAST-204ENST00000621856 CNIH3Q8TBE1 160 aa19.84■□□□□ 0.77
SPAST-204ENST00000621856 SLC41A3Q96GZ6 507 aa19.84■□□□□ 0.77
SPAST-204ENST00000621856 ANKRD19PQ9H560 264 aa19.84■□□□□ 0.77
SPAST-204ENST00000621856 E9PQ18 207 aa19.83■□□□□ 0.77
SPAST-204ENST00000621856 PRKNO60260 465 aaPredicted RBP19.83■□□□□ 0.77
SPAST-204ENST00000621856 CPNE3O75131 537 aaKnown RBP19.83■□□□□ 0.77
SPAST-204ENST00000621856 TFAP2AP05549 437 aa19.83■□□□□ 0.77
SPAST-204ENST00000621856 PRG2P13727 222 aa19.83■□□□□ 0.77
SPAST-204ENST00000621856 EEF1B2P24534 225 aaKnown RBP19.83■□□□□ 0.77
SPAST-204ENST00000621856 GGT2P36268 569 aa19.83■□□□□ 0.77
SPAST-204ENST00000621856 ATP12AP54707 1039 aa19.83■□□□□ 0.77
SPAST-204ENST00000621856 TUBA4AP68366 448 aa19.83■□□□□ 0.77
SPAST-204ENST00000621856 CDK5R2Q13319 367 aa19.83■□□□□ 0.77
SPAST-204ENST00000621856 DECR1Q16698 335 aa19.83■□□□□ 0.77
SPAST-204ENST00000621856 HLA-DQA1Q5Y7H0 255 aa19.83■□□□□ 0.77
SPAST-204ENST00000621856 ZNF385CQ66K41 422 aaPredicted RBP19.83■□□□□ 0.77
SPAST-204ENST00000621856 MORN4Q8NDC4 146 aa19.83■□□□□ 0.77
SPAST-204ENST00000621856 GAL3ST4Q96RP7 486 aa19.83■□□□□ 0.77
SPAST-204ENST00000621856 DGCR6LQ9BY27 220 aa19.83■□□□□ 0.77
SPAST-204ENST00000621856 EVA1AQ9H8M9 152 aa19.83■□□□□ 0.77
SPAST-204ENST00000621856 RXFP3Q9NSD7 469 aa19.83■□□□□ 0.77
SPAST-204ENST00000621856 TUBA8Q9NY65 449 aaPredicted RBP19.83■□□□□ 0.77
SPAST-204ENST00000621856 TRIM64A6NGJ6 449 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 GDF9O60383 454 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 AGXTP21549 392 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 NR1H2P55055 460 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 ESRRGP62508 458 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 ZNF141Q15928 474 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.82■□□□□ 0.76
SPAST-204ENST00000621856 CCDC157Q569K6 752 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 ZNF730Q6ZMV8 503 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 RRM2BQ7LG56 351 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 GDF7Q7Z4P5 450 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 BMPERQ8N8U9 685 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 FBLIM1Q8WUP2 373 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 LCORQ96JN0 433 aaPredicted RBP19.82■□□□□ 0.76
SPAST-204ENST00000621856 NXF5Q9H1B4 397 aaKnown RBP19.82■□□□□ 0.76
SPAST-204ENST00000621856 BLOC1S6Q9UL45 172 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 PCDHGA6Q9Y5G7 932 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 A0A087WUU8 490 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 C2orf92A0A1B0GVN3 265 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 FRG2CA6NGY1 282 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 IDSB3KWA1 339 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 ONECUT2O95948 504 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 CCL4P13236 92 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 OSMP13725 252 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 POU1F1P28069 291 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 IFNGR2P38484 337 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 HLCSP50747 726 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 MC2RQ01718 297 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 MAD2L1BPQ15013 274 aaPredicted RBP19.82■□□□□ 0.76
SPAST-204ENST00000621856 SATL1Q86VE3 508 aa19.82■□□□□ 0.76
SPAST-204ENST00000621856 FAM81AQ8TBF8 368 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms