RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 IFI30P13284 250 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 CHMP24386 653 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 AVPR2P30518 371 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 KCNJ5P48544 419 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 RGS19P49795 217 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 ITGA1P56199 1179 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 CHAF1BQ13112 559 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 NPTX1Q15818 432 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 MARVELD2Q8N4S9 558 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 HSPBAP1Q96EW2 488 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 GIMAP5Q96F15 307 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 MS4A4EQ96PG1 132 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 TSC22D3Q99576 134 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 MS4A12Q9NXJ0 267 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 B3GALT1Q9Y5Z6 326 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 MAP1AP78559 2803 aaPredicted RBP9.76□□□□□ -0.85
VPS11-208ENST00000621676 H3BNH8 94 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 H7C1C5 153 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 ARHGAP33O14559 1287 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 ADAMDEC1O15204 470 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 KCNK2O95069 426 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 CSTAP01040 98 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 HEXBP07686 556 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 CLUP10909 449 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 GSTT1P30711 240 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 HCCSP53701 268 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 LCN6P62502 163 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 TOMM34Q15785 309 aaPredicted RBP9.76□□□□□ -0.85
VPS11-208ENST00000621676 C6orf141Q5SZD1 244 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 C1QL3Q5VWW1 255 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 ACSM5Q6NUN0 579 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 ZNF836Q6ZNA1 936 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 PLEKHG7Q6ZR37 379 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 LINC00471Q8N535 108 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 CLDN22Q8N7P3 220 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 GALNT6Q8NCL4 622 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 GPR119Q8TDV5 335 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 VMP1Q96GC9 406 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 MPP4Q96JB8 637 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 CRB3Q9BUF7 120 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 TOR4AQ9NXH8 423 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 RARRES3Q9UL19 164 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 SLC6A5Q9Y345 797 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 SNX5Q9Y5X3 404 aa9.76□□□□□ -0.85
VPS11-208ENST00000621676 LINC00854A0A1B0GVQ3 168 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 A0A1W2PPW3 197 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 H3BML4 177 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 TNFSF14O43557 240 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 ZNF354AO60765 605 aaPredicted RBP9.75□□□□□ -0.85
VPS11-208ENST00000621676 GPR85P60893 370 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 CDK5R2Q13319 367 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 GINS1Q14691 196 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 LARS2Q15031 903 aaKnown RBP9.75□□□□□ -0.85
VPS11-208ENST00000621676 ODF4Q2M2E3 257 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 TYW3Q6IPR3 259 aaKnown RBP9.75□□□□□ -0.85
VPS11-208ENST00000621676 PLXDC2Q6UX71 529 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 APOOLQ6UXV4 268 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 SPATC1Q76KD6 591 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 PIWIL3Q7Z3Z3 882 aaKnown RBP9.75□□□□□ -0.85
VPS11-208ENST00000621676 LHFPL3Q86UP9 236 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 DTX3Q8N9I9 347 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 CHDHQ8NE62 594 aaPredicted RBP9.75□□□□□ -0.85
VPS11-208ENST00000621676 ZNF354BQ96LW1 612 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 NPAS1Q99742 590 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 NUDT9Q9BW91 350 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 EPB41L1Q9H4G0 881 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 FOLH1BQ9HBA9 442 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 KLHL1Q9NR64 748 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 KIAA1549LQ6ZVL6 1849 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 FREM3P0C091 2139 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 A0A1B0GTQ1 180 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 SPAARA0A1B0GVQ0 90 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 SH3D21A4FU49 640 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 CDC42EP2O14613 210 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 DENRO43583 198 aaKnown RBP9.75□□□□□ -0.85
VPS11-208ENST00000621676 STX11O75558 287 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 MT-ND2P03891 347 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 ELAVL4P26378 380 aaKnown RBP9.75□□□□□ -0.85
VPS11-208ENST00000621676 RAB38P57729 211 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 CRYZQ08257 329 aaKnown RBP9.75□□□□□ -0.85
VPS11-208ENST00000621676 NR0B2Q15466 257 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 MICAQ29983 383 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 BTBD16Q32M84 506 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 NKAIN1Q4KMZ8 207 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 SHQ1Q6PI26 577 aaKnown RBP9.75□□□□□ -0.85
VPS11-208ENST00000621676 LYPD4Q6UWN0 246 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 NPSR1Q6W5P4 371 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 CAMKMTQ7Z624 323 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 SLC34A3Q8N130 599 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 STX19Q8N4C7 294 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 SIRT6Q8N6T7 355 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 OR52E4Q8NGH9 312 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 OR9Q1Q8NGQ5 310 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 PTRH2Q9Y3E5 179 aaKnown RBP9.75□□□□□ -0.85
VPS11-208ENST00000621676 HCN4Q9Y3Q4 1203 aa9.75□□□□□ -0.85
VPS11-208ENST00000621676 A0A1W2PPC1 479 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 SRPX2O60687 465 aaPredicted RBP9.74□□□□□ -0.85
VPS11-208ENST00000621676 KRT20P35900 424 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 MXD1Q05195 221 aa9.74□□□□□ -0.85
VPS11-208ENST00000621676 CD226Q15762 336 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms