RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 OR10A5Q9H207 317 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 ALG9Q9H6U8 611 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 WDR55Q9H6Y2 383 aaPredicted RBP7.11□□□□□ -1.27
CLK1-215ENST00000621181 ACTR8Q9H981 624 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 CXorf21Q9HAI6 301 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 GALNT9Q9HCQ5 603 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 LYARQ9NX58 379 aaKnown RBP7.11□□□□□ -1.27
CLK1-215ENST00000621181 KLHL28Q9NXS3 571 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 KLRF1Q9NZS2 232 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 MID2Q9UJV3 735 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 PRPF19Q9UMS4 504 aaKnown RBP7.11□□□□□ -1.27
CLK1-215ENST00000621181 MAPRE3Q9UPY8 281 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 TESMINQ9Y4I5 508 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 PCDHGA11Q9Y5H2 935 aa7.11□□□□□ -1.27
CLK1-215ENST00000621181 USF3Q68DE3 2245 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 EXPH5Q8NEV8 1989 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 K7EPI3 171 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 EEDO75530 441 aaKnown RBP7.1□□□□□ -1.27
CLK1-215ENST00000621181 BAG2O95816 211 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 AIFM1O95831 613 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 GBAP04062 536 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 ABCB1P08183 1280 aaPredicted RBP7.1□□□□□ -1.27
CLK1-215ENST00000621181 NCF2P19878 526 aaPredicted RBP7.1□□□□□ -1.27
CLK1-215ENST00000621181 CHMP24386 653 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 PEX2P28328 305 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 FAM27E3Q08E93 113 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 FUT7Q11130 342 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 CUL3Q13618 768 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 ACKR1Q16570 336 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 LPCAT4Q643R3 524 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 C17orf47Q8NEP4 570 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 RP9Q8TA86 221 aaKnown RBP7.1□□□□□ -1.27
CLK1-215ENST00000621181 STAG3L4Q8TBR4 150 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 ZFAND2BQ8WV99 257 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 REPS1Q96D71 796 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 WFIKKN1Q96NZ8 548 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 BTBD9Q96Q07 612 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 OSBPL11Q9BXB4 747 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 FAM192AQ9GZU8 254 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 SERHLQ9NQF3 203 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 CPSF2Q9P2I0 782 aaKnown RBP7.1□□□□□ -1.27
CLK1-215ENST00000621181 CLCF1Q9UBD9 225 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 TRPS1Q9UHF7 1281 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 ASB4Q9Y574 426 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 ANGPTL3Q9Y5C1 460 aa7.1□□□□□ -1.27
CLK1-215ENST00000621181 A0A0A6YYD5 115 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 A0A1W2PS29 197 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 DEFB108AA8MXU0 73 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 SLCO1B7G3V0H7 640 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 PLOD2O00469 737 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 SDHDO14521 159 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 MSTNO14793 375 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 PGRMC2O15173 223 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 NPHS1O60500 1241 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 ICOSLGO75144 302 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 PPM1BO75688 479 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 CBR3O75828 277 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 CNOT4O95628 575 aaKnown RBP7.09□□□□□ -1.27
CLK1-215ENST00000621181 CT62P0C5K7 136 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 UBTFL6P0CB48 400 aaPredicted RBP7.09□□□□□ -1.27
CLK1-215ENST00000621181 UQCRBP14927 111 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 NT5EP21589 574 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 PTX3P26022 381 aaPredicted RBP7.09□□□□□ -1.27
CLK1-215ENST00000621181 MC3RP41968 323 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 KCNJ5P48544 419 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 ARFIP1P53367 373 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 AQP4P55087 323 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 RAB10P61026 200 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 EEF1A1P68104 462 aaKnown RBP7.09□□□□□ -1.27
CLK1-215ENST00000621181 PLCXD2Q0VAA5 305 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 SNTA1Q13424 505 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 CEACAM7Q14002 265 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 SH2D4BQ5SQS7 431 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 EEF1A1P5Q5VTE0 462 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 MRM1Q6IN84 353 aaKnown RBP7.09□□□□□ -1.27
CLK1-215ENST00000621181 SLC30A6Q6NXT4 461 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 UGT2A3Q6UWM9 527 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 C20orf204Q6ZNR8 217 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 CHMP1BQ7LBR1 199 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 P4HA3Q7Z4N8 544 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 ADGRE4PQ86SQ3 457 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 NUDT13Q86X67 352 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 SNX32Q86XE0 403 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 ZNF615Q8N8J6 731 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 CNEP1R1Q8N9A8 125 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 SLC26A7Q8TE54 656 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 NANOS1Q8WY41 292 aaKnown RBP7.09□□□□□ -1.27
CLK1-215ENST00000621181 NXNL1Q96CM4 212 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 UBXN10Q96LJ8 280 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 UCN2Q96RP3 112 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 G6PC3Q9BUM1 346 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 ZNF717Q9BY31 904 aaPredicted RBP7.09□□□□□ -1.27
CLK1-215ENST00000621181 KLHL4Q9C0H6 718 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 NXF5Q9H1B4 397 aaKnown RBP7.09□□□□□ -1.27
CLK1-215ENST00000621181 DDX31Q9H8H2 851 aaKnown RBP7.09□□□□□ -1.27
CLK1-215ENST00000621181 TAS2R10Q9NYW0 307 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 NUDT4Q9NZJ9 180 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 EHD3Q9NZN3 535 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 RIMS3Q9UJD0 308 aa7.09□□□□□ -1.27
CLK1-215ENST00000621181 EXO1Q9UQ84 846 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms