RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 OR5M3Q8NGP4 307 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 OR6Q1Q8NGQ2 317 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 JOSD2Q8TAC2 188 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 SPTSSAQ969W0 71 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 PRDM6Q9NQX0 595 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 EBF1Q9UH73 591 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 ZDHHC2Q9UIJ5 367 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 SDC3O75056 442 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 MAKP20794 623 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 SNRPD2P62316 118 aaKnown RBP6.81□□□□□ -1.32
COLCA1-205ENST00000620864 RAB40BQ12829 278 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 SNTB1Q13884 538 aaKnown RBP6.81□□□□□ -1.32
COLCA1-205ENST00000620864 ZNF74Q16587 644 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 FAM205BPQ63HN1 556 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 ZDHHC24Q6UX98 284 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 CD300LGQ6UXG3 332 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 ZFAND4Q86XD8 727 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 SULF2Q8IWU5 870 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 STEAP2Q8NFT2 490 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 OR2A12Q8NGT7 310 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 OR5H6Q8NGV6 325 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 SH3YL1Q96HL8 342 aaPredicted RBP6.81□□□□□ -1.32
COLCA1-205ENST00000620864 RNF170Q96K19 258 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 DKKL1Q9UK85 242 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 NUPL2O15504 423 aaKnown RBP6.81□□□□□ -1.32
COLCA1-205ENST00000620864 DPM1O60762 260 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 CPNE6O95741 557 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 SPP1P10451 314 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 ITGAMP11215 1152 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 NKX2-5P52952 324 aaPredicted RBP6.81□□□□□ -1.32
COLCA1-205ENST00000620864 UFM1P61960 85 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 SIM1P81133 766 aaPredicted RBP6.81□□□□□ -1.32
COLCA1-205ENST00000620864 RSPO4Q2I0M5 234 aaPredicted RBP6.81□□□□□ -1.32
COLCA1-205ENST00000620864 TMEM151AQ8N4L1 468 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 CNIH3Q8TBE1 160 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 ZBTB8AQ96BR9 441 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 NUS1Q96E22 293 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 BSCL2Q96G97 398 aaPredicted RBP6.81□□□□□ -1.32
COLCA1-205ENST00000620864 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.81□□□□□ -1.32
COLCA1-205ENST00000620864 GCM1Q9NP62 436 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 C1orf123Q9NWV4 160 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 CD84Q9UIB8 345 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 LSM5Q9Y4Y9 91 aaKnown RBP6.81□□□□□ -1.32
COLCA1-205ENST00000620864 TEX264Q9Y6I9 313 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 CNTNAP1P78357 1384 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 LOXHD1Q8IVV2 1947 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 TCRBV5S4A2TA0A5A2 114 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 E7ESA3 106 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 PYCR1P32322 319 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 CHRNA4P43681 627 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 GCGRP47871 477 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 RBM39Q14498 530 aaKnown RBP6.8□□□□□ -1.32
COLCA1-205ENST00000620864 RPL22L1Q6P5R6 122 aaKnown RBP6.8□□□□□ -1.32
COLCA1-205ENST00000620864 CFAP77Q6ZQR2 320 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 KLHDC8BQ8IXV7 354 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 KREMEN1Q96MU8 473 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 FBRSL1Q9HCM7 1045 aaKnown RBP6.8□□□□□ -1.32
COLCA1-205ENST00000620864 DZANK1Q9NVP4 752 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 TAS2R16Q9NYV7 291 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 ARHGEF28Q8N1W1 1705 aaKnown RBP6.8□□□□□ -1.32
COLCA1-205ENST00000620864 LTBP4Q8N2S1 1624 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 A0A1W2PPL8 197 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 CLDN24A6NM45 220 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 CIDEAO60543 219 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 KLK1P06870 262 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 LAP3P28838 519 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 TAGLN2P37802 199 aaKnown RBP6.8□□□□□ -1.32
COLCA1-205ENST00000620864 TAF10Q12962 218 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 TMIGD1Q6UXZ0 262 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 LRRTM4Q86VH4 590 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 TMEM151BQ8IW70 566 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 TXNDC5Q8NBS9 432 aaKnown RBP6.8□□□□□ -1.32
COLCA1-205ENST00000620864 ST7LQ8TDW4 575 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 PXYLP1Q8TE99 480 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 RBPMSQ93062 196 aaKnown RBP6.8□□□□□ -1.32
COLCA1-205ENST00000620864 HSD17B14Q9BPX1 270 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 KATNB1Q9BVA0 655 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 SOX17Q9H6I2 414 aaPredicted RBP6.8□□□□□ -1.32
COLCA1-205ENST00000620864 C2orf42Q9NWW7 574 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 EXOGQ9Y2C4 368 aaKnown RBP6.8□□□□□ -1.32
COLCA1-205ENST00000620864 PCDHA2Q9Y5H9 948 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 A0A1W2PRU2 124 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 NDUFS4O43181 175 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 ERI3O43414 337 aaKnown RBP6.8□□□□□ -1.32
COLCA1-205ENST00000620864 SOX14O95416 240 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 TIMP1P01033 207 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 C4BPAP04003 597 aaKnown RBP6.8□□□□□ -1.32
COLCA1-205ENST00000620864 G6PDP11413 515 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 M6PRP20645 277 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 OPRL1P41146 370 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 TSFMP43897 325 aaKnown RBP6.8□□□□□ -1.32
COLCA1-205ENST00000620864 KLF1Q13351 362 aaPredicted RBP6.8□□□□□ -1.32
COLCA1-205ENST00000620864 ADGRF1Q5T601 910 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 ARHGAP40Q5TG30 622 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 METTL2BQ6P1Q9 378 aaKnown RBP6.8□□□□□ -1.32
COLCA1-205ENST00000620864 TPRG1Q6ZUI0 275 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 IGFN1Q86VF2 1251 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 LSMEM2Q8N112 164 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 OR5T1Q8NG75 326 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 LRR1Q96L50 414 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms