RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 POT1Q9NUX5 634 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 ASB4Q9Y574 426 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 ABHD14A-ACY1A0A1B0GW23 586 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 FAM25EA8MYX2 175 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 TMEM229AB2RXF0 380 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 NDUFA2O43678 99 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 CREBL2O60519 120 aaPredicted RBP9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 SLC2A10O95528 541 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 PYCR1P32322 319 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 SLC6A11P48066 632 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 CLDN12P56749 244 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 SMIM11AP58511 58 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 STXBP1P61764 594 aaKnown RBP9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 PLD1Q13393 1074 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 HLXQ14774 488 aaPredicted RBP9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 UPP1Q16831 310 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 RGS7BPQ6MZT1 257 aaPredicted RBP9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 TMUB2Q71RG4 321 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 LIMS2Q7Z4I7 341 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 SPAG16Q8N0X2 631 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 OR5D16Q8NGK9 328 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 C1orf216Q8TAB5 229 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 SCARB1Q8WTV0 552 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 ORAI1Q96D31 301 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 ZNF607Q96SK3 696 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 ARHGAP9Q9BRR9 750 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 MED18Q9BUE0 208 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 ZNF471Q9BX82 626 aaPredicted RBP9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 NOX3Q9HBY0 568 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 GPN1Q9HCN4 374 aaPredicted RBP9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 EQTNQ9NQ60 294 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 C1GALT1Q9NS00 363 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 CYSLTR2Q9NS75 346 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 C14orf105Q9NVL8 296 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 MTMR11A4FU01 709 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 AIPO00170 330 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 SOCS6O14544 535 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 FZD6O60353 706 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 RGS9O75916 674 aaPredicted RBP9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 SERPINA3P01011 423 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 FABP1P07148 127 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 GNSP15586 552 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 PREPP48147 710 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 GATMP50440 423 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 RNF144AP50876 292 aaPredicted RBP9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 PRMT2P55345 433 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 HBMQ6B0K9 141 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 MSANTD1Q6ZTZ1 278 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 OAFQ86UD1 273 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 HORMAD2Q8N7B1 307 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 OR4D9Q8NGE8 314 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 OR4D10Q8NGI6 311 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 WDR48Q8TAF3 677 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 RFKQ969G6 155 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 TRIM43Q96BQ3 446 aaPredicted RBP9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 POLDIP3Q9BY77 421 aaKnown RBP9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 BTBD1Q9H0C5 482 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 DNTTIP1Q9H147 329 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 ASF1AQ9Y294 204 aa9.18□□□□□ -0.94
TNFAIP3-210ENST00000620204 ZNF705EA8MWA4 302 aaPredicted RBP9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 GNB5O14775 395 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 ADAMTS4O75173 837 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 SOX30O94993 753 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 IL3P08700 152 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 SULT1A3P0DMM9 295 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 SULT1A4P0DMN0 295 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 NPR2P20594 1047 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 PSMB1P20618 241 aaKnown RBP9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 ACHEP22303 614 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 ACRV1P26436 265 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 PPP2R1BP30154 601 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 TIA1P31483 386 aaKnown RBP eCLIP9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 NSG1P42857 185 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 ZP1P60852 638 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 SORDQ00796 357 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 CCDC157Q569K6 752 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 NHLRC3Q5JS37 347 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 VASNQ6EMK4 673 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 RAB12Q6IQ22 244 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 ZNF600Q6ZNG1 722 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 BTN2A1Q7KYR7 527 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 COMMD6Q7Z4G1 85 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 NXPE1Q8N323 547 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 FAM26EQ8N5C1 309 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 ACOT12Q8WYK0 555 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 CHFRQ96EP1 664 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 SEMA4CQ9C0C4 833 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 TREM1Q9NP99 234 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 PRMT8Q9NR22 394 aaPredicted RBP9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 LAMA2P24043 3122 aaKnown RBP9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 A0A1W2PQ45 241 aaPredicted RBP9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 A0A1W2PQY0 241 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 OR5K4A6NMS3 321 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 AGAP14A8MT82 685 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 STK25O00506 426 aa9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 CASC3O15234 703 aaKnown RBP9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 MAGEB4O15481 346 aaPredicted RBP9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 PRICKLE3O43900 615 aaPredicted RBP9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 F12P00748 615 aaPredicted RBP9.17□□□□□ -0.94
TNFAIP3-210ENST00000620204 HLA-DQB1P01920 261 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms