RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 OR5AK3PQ8NH89 298 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 COQ8AQ8NI60 647 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 ZNF607Q96SK3 696 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 DPH7Q9BTV6 452 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 SARGQ9BW04 601 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 FAIM2Q9BWQ8 316 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 JAM3Q9BX67 310 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 SLC19A3Q9BZV2 496 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 ATG10Q9H0Y0 220 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.15□□□□□ -0.78
UPF3A-212ENST00000619079 OR6C2Q9NZP2 312 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 CPNE7Q9UBL6 633 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 PURGQ9UJV8 347 aaKnown RBP10.15□□□□□ -0.78
UPF3A-212ENST00000619079 RASD1Q9Y272 281 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 SLC9A8Q9Y2E8 581 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 A0A1W2PRB8 838 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 RGS11O94810 467 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 PLATP00750 562 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 IGHA1P01876 353 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 APOC3P02656 99 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 EPHX1P07099 455 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 ZNF8P17098 575 aaPredicted RBP10.15□□□□□ -0.79
UPF3A-212ENST00000619079 MMP11P24347 488 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 S100A11P31949 105 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 THBS2P35442 1172 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 CCR6P51684 374 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 AKR1D1P51857 326 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 RAB8AP61006 207 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 RHOAP61586 193 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 ZNF155Q12901 538 aaPredicted RBP10.15□□□□□ -0.79
UPF3A-212ENST00000619079 GRM7Q14831 915 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 TRAM1Q15629 374 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 C1orf94Q6P1W5 598 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 PODNL1Q6PEZ8 512 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 THOC6Q86W42 341 aaKnown RBP10.15□□□□□ -0.79
UPF3A-212ENST00000619079 ZNF454Q8N9F8 522 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 CAMKVQ8NCB2 501 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 GPR32P1Q8NGA4 272 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 OR4K5Q8NGD3 323 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 OR8K3Q8NH51 312 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 TRMT10AQ8TBZ6 339 aaKnown RBP10.15□□□□□ -0.79
UPF3A-212ENST00000619079 MS4A3Q96HJ5 214 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 SLC38A3Q99624 504 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 FNDC11Q9BVV2 318 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 IGFLR1Q9H665 355 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 WDR26Q9H7D7 661 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 ACTR10Q9NZ32 417 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 MED11Q9P086 117 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 AKAP7Q9P0M2 348 aaPredicted RBP10.15□□□□□ -0.79
UPF3A-212ENST00000619079 SEC14L3Q9UDX4 400 aa10.15□□□□□ -0.79
UPF3A-212ENST00000619079 AGAP14A8MT82 685 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 E7EQ34 232 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 RNF13O43567 381 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 GSTZ1O43708 216 aaPredicted RBP10.14□□□□□ -0.79
UPF3A-212ENST00000619079 SDC3O75056 442 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 ETHE1O95571 254 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 BCHEP06276 602 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 ADH1AP07327 375 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 CD3GP09693 182 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 FOSL2P15408 326 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 PPP3CBP16298 524 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 CXCL2P19875 107 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 OR1D2P34982 312 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 IFNGR2P38484 337 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 CD79BP40259 229 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 KCNJ5P48544 419 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 SEMG2Q02383 582 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 DUSP4Q13115 394 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 GPR17Q13304 367 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 GK2Q14410 553 aaPredicted RBP10.14□□□□□ -0.79
UPF3A-212ENST00000619079 ATP13A5Q4VNC0 1218 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 PLEKHS1Q5SXH7 462 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 PDSS1Q5T2R2 415 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 ADNP2Q6IQ32 1131 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 SMARCD3Q6STE5 483 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 NR2C2APQ86WQ0 139 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 STPG2Q8N412 459 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 MYLIPQ8WY64 445 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 ASIC4Q96FT7 647 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 FERD3LQ96RJ6 166 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 MTG2Q9H4K7 406 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 MYNNQ9NPC7 610 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 NPDC1Q9NQX5 325 aaPredicted RBP10.14□□□□□ -0.79
UPF3A-212ENST00000619079 GKN1Q9NS71 199 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 LHX3Q9UBR4 397 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 EXOGQ9Y2C4 368 aaKnown RBP10.14□□□□□ -0.79
UPF3A-212ENST00000619079 TRANK1O15050 2925 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 NAP1L6A6NFF2 107 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 MCRIP1C9JLW8 97 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 LGALS8O00214 317 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 CTDSPLO15194 276 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 SGTAO43765 313 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 SEMA7AO75326 666 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 UBXN7O94888 489 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 OAZ2O95190 189 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 EFEMP2O95967 443 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 HPXP02790 462 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 CD96P40200 585 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 KIAA1024LP59773 190 aa10.14□□□□□ -0.79
UPF3A-212ENST00000619079 RPS24P62847 133 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms