RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 SERTM1A2A2V5 107 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 ESPNB1AK53 854 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 K7EPI3 171 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 NTN1O95631 604 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 ZSCAN5DPP0CG00 497 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 ARAFP10398 606 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 MANFP55145 182 aaKnown RBP4.03□□□□□ -1.76
SNCA-213ENST00000618500 ID2Q02363 134 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 C17orf67Q0P5P2 114 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 RAB35Q15286 201 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 ZKSCAN8Q15776 578 aaPredicted RBP4.03□□□□□ -1.76
SNCA-213ENST00000618500 MST1LQ2TV78 715 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 EXOSC6Q5RKV6 272 aaKnown RBP4.03□□□□□ -1.76
SNCA-213ENST00000618500 B3GLCTQ6Y288 498 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 CYS1Q717R9 158 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 MTERF4Q7Z6M4 381 aaKnown RBP4.03□□□□□ -1.76
SNCA-213ENST00000618500 PPIL6Q8IXY8 311 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 RNF214Q8ND24 703 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 TOR1AIP2Q8NFQ8 470 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 OR10D3Q8NH80 312 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 NEUROG1Q92886 237 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 ZNF317Q96PQ6 595 aaPredicted RBP4.03□□□□□ -1.76
SNCA-213ENST00000618500 PSD2Q9BQI7 771 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 BRF2Q9HAW0 419 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 NPAP1Q9NZP6 1156 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 ZANQ9Y493 2812 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 STAB1Q9NY15 2570 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 PRKDCP78527 4128 aaKnown RBP4.03□□□□□ -1.76
SNCA-213ENST00000618500 IGHV4-61A0A0C4DH41 118 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 A0A0G2JN53 185 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 CYTIPO60759 359 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 NDUFS7O75251 213 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 GUCA1CO95843 209 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 YES1P07947 543 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 CD1DP15813 335 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 CD40P25942 277 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 IL12BP29460 328 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 KRT20P35900 424 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 FABP6P51161 128 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 PSMD4P55036 377 aaKnown RBP4.03□□□□□ -1.76
SNCA-213ENST00000618500 IL13RA1P78552 427 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 IRF9Q00978 393 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 IRF8Q02556 426 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 FAPQ12884 760 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 CHIT1Q13231 466 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 RIN1Q13671 783 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 SLMAPQ14BN4 828 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 PLPPR5Q32ZL2 321 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 HSP90AA5PQ58FG0 334 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 TMEM201Q5SNT2 666 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 KPRPQ5T749 579 aaPredicted RBP4.03□□□□□ -1.76
SNCA-213ENST00000618500 CPTPQ5TA50 214 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 ABLIM2Q6H8Q1 611 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 ADNP2Q6IQ32 1131 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 NPSR1Q6W5P4 371 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 PEG10Q86TG7 708 aaKnown RBP4.03□□□□□ -1.76
SNCA-213ENST00000618500 ZC3HC1Q86WB0 502 aaKnown RBP4.03□□□□□ -1.76
SNCA-213ENST00000618500 METTL4Q8N3J2 472 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 ZNF433Q8N7K0 673 aaPredicted RBP4.03□□□□□ -1.76
SNCA-213ENST00000618500 NUP37Q8NFH4 326 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 HUS1BQ8NHY5 278 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 C1orf54Q8WWF1 131 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 TMBIM1Q969X1 311 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 EGFL8Q99944 293 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 TRMOQ9BU70 441 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 NTMT1Q9BV86 223 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 PLK3Q9H4B4 646 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 FKRPQ9H9S5 495 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 NTN4Q9HB63 628 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 C3orf14Q9HBI5 128 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 PLAC1Q9HBJ0 212 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 GIN1Q9NXP7 522 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 AHSPQ9NZD4 102 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 EHD3Q9NZN3 535 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 PCDHB10Q9UN67 800 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 PLLPQ9Y342 182 aa4.03□□□□□ -1.76
SNCA-213ENST00000618500 ARPC4-TTLL3A0A0A6YYG9 625 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 B4DSR2 109 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 ZNF814B7Z6K7 855 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 B9A039 149 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 EEDO75530 441 aaKnown RBP4.03□□□□□ -1.77
SNCA-213ENST00000618500 PRKD3O94806 890 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 IPO7O95373 1038 aaKnown RBP4.03□□□□□ -1.77
SNCA-213ENST00000618500 ADAP00813 363 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 S100BP04271 92 aaPredicted RBP4.03□□□□□ -1.77
SNCA-213ENST00000618500 HSD3B1P14060 373 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 GATA3P23771 443 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 HSD3B2P26439 372 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 MAPK1P28482 360 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 SRP14P37108 136 aaKnown RBP4.03□□□□□ -1.77
SNCA-213ENST00000618500 RFX3P48380 749 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 EVX1P49640 407 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 NEK2P51955 445 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 CLDN20P56880 219 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 GPX6P59796 221 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 ACTG1P63261 375 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 ERCC6LQ2NKX8 1250 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 RNASEH2BQ5TBB1 312 aaKnown RBP4.03□□□□□ -1.77
SNCA-213ENST00000618500 RAET1LQ5VY80 246 aa4.03□□□□□ -1.77
SNCA-213ENST00000618500 ANKRD22Q5VYY1 191 aa4.03□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms