RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 PLBD1Q6P4A8 553 aa13.06□□□□□ -0.32
CHD1-212ENST00000614616 LINGO4Q6UY18 593 aa13.06□□□□□ -0.32
CHD1-212ENST00000614616 TMEM145Q8NBT3 493 aa13.06□□□□□ -0.32
CHD1-212ENST00000614616 HMGB4Q8WW32 186 aa13.06□□□□□ -0.32
CHD1-212ENST00000614616 TMEM68Q96MH6 324 aa13.06□□□□□ -0.32
CHD1-212ENST00000614616 SCAF4O95104 1147 aaKnown RBP13.05□□□□□ -0.32
CHD1-212ENST00000614616 RAB1AP62820 205 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 C18orf63Q68DL7 685 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 HBMQ6B0K9 141 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 CLEC9AQ6UXN8 241 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 PIGVQ9NUD9 493 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 ARAP2Q8WZ64 1704 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 ANKRD66B4E2M5 251 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 PPP1R11O60927 126 aaPredicted RBP13.05□□□□□ -0.32
CHD1-212ENST00000614616 POP4O95707 220 aaKnown RBP13.05□□□□□ -0.32
CHD1-212ENST00000614616 ZNF792Q3KQV3 632 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 ETFRF1Q6IPR1 90 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 IQCF1Q8N6M8 205 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 MAL2Q969L2 176 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 MCHR1Q99705 422 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 HMX1Q9NP08 348 aaPredicted RBP13.05□□□□□ -0.32
CHD1-212ENST00000614616 SPO11Q9Y5K1 396 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 TXNDC12O95881 172 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 ATP1B2P14415 290 aaPredicted RBP13.05□□□□□ -0.32
CHD1-212ENST00000614616 NAA10P41227 235 aaPredicted RBP13.05□□□□□ -0.32
CHD1-212ENST00000614616 CAV2P51636 162 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 VEZF1Q14119 521 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 MCEMP1Q8IX19 187 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 MEGF11A6BM72 1044 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 STK17BO94768 372 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 UBL3O95164 117 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 PPA1Q15181 289 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 AAK1Q2M2I8 961 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 C2orf76Q3KRA6 126 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 LARP4Q71RC2 724 aaKnown RBP eCLIP13.05□□□□□ -0.325e-9■□□□□ 8.9
CHD1-212ENST00000614616 TAC4Q86UU9 113 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 PDZD7Q9H5P4 517 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 SERPINA7P05543 415 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 CFHP08603 1231 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 GDF5P43026 501 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 MRPS6P82932 125 aaKnown RBP13.05□□□□□ -0.32
CHD1-212ENST00000614616 NKPD1Q17RQ9 610 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 GTDC1Q4AE62 458 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 RBMXL1Q96E39 390 aaKnown RBP13.05□□□□□ -0.32
CHD1-212ENST00000614616 MDFIC2A0A1B0GVS7 189 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 RNF212BA8MTL3 300 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 HLA-HP01893 362 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 ACP2P11117 423 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 H3F3AP84243 136 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 ZNF417Q8TAU3 575 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 DPH2Q9BQC3 489 aaPredicted RBP13.05□□□□□ -0.32
CHD1-212ENST00000614616 TMEM121BQ9BXQ6 578 aaPredicted RBP13.05□□□□□ -0.32
CHD1-212ENST00000614616 PRRG4Q9BZD6 226 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 ABHD16BQ9H3Z7 469 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 DPEP3Q9H4B8 488 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 BRF2Q9HAW0 419 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 RNF19AQ9NV58 838 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 PSORS1C1Q9UIG5 152 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 FBXL2Q9UKC9 423 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 BCL9LQ86UU0 1499 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 FPGSQ05932 587 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 SLC18B1Q6NT16 456 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 TMEM88Q6PEY1 159 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 CHST9Q7L1S5 443 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 NDUFAF7Q7L592 441 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 PDZD3Q86UT5 571 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 ZNF808Q8N4W9 903 aaPredicted RBP13.05□□□□□ -0.32
CHD1-212ENST00000614616 PQLC3Q8N755 202 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 PPTC7Q8NI37 304 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 PXYLP1Q8TE99 480 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 MOCOSQ96EN8 888 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 INPP5KQ9BT40 448 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 BCO2Q9BYV7 579 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 POFUT1Q9H488 388 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 GALNT9Q9HCQ5 603 aa13.05□□□□□ -0.32
CHD1-212ENST00000614616 LILRB5O75023 590 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 CDC123O75794 336 aaPredicted RBP13.04□□□□□ -0.32
CHD1-212ENST00000614616 CRYBB1P53674 252 aaPredicted RBP13.04□□□□□ -0.32
CHD1-212ENST00000614616 PSPHP78330 225 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 DGKZQ13574 1117 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 TTLL10Q6ZVT0 673 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 DUS3LQ96G46 650 aaKnown RBP13.04□□□□□ -0.32
CHD1-212ENST00000614616 TSGA13Q96PP4 275 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 TESQ9UGI8 421 aaKnown RBP13.04□□□□□ -0.32
CHD1-212ENST00000614616 EVLQ9UI08 416 aaPredicted RBP13.04□□□□□ -0.32
CHD1-212ENST00000614616 KPTNQ9Y664 436 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 HEATR5AQ86XA9 2040 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 SNCAP37840 140 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 SGSHP51688 502 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 TNK1Q13470 666 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 ACSM3Q53FZ2 586 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 OR6M1Q8NGM8 313 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 WDR20Q8TBZ3 569 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 SLC25A44Q96H78 314 aaPredicted RBP13.04□□□□□ -0.32
CHD1-212ENST00000614616 DGAT2Q96PD7 388 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 NMNAT1Q9HAN9 279 aaPredicted RBP13.04□□□□□ -0.32
CHD1-212ENST00000614616 BCO1Q9HAY6 547 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 V9GY05 133 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 NRP1O14786 923 aa13.04□□□□□ -0.32
CHD1-212ENST00000614616 ZNF44P15621 663 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms