RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 MAOBP27338 520 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 CMPK1P30085 196 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 MC3RP41968 323 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 OMPP47874 163 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 STXBP1P61764 594 aaKnown RBP13.71□□□□□ -0.21
CDH1-213ENST00000612417 CHRNEQ04844 493 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 TGM3Q08188 693 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 C1orf61Q13536 156 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 GPR50Q13585 617 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 TMEM44Q2T9K0 475 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 CD200R1LQ6Q8B3 271 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 HSDL2Q6YN16 418 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 QSOX2Q6ZRP7 698 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 UBALD2Q8IYN6 164 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 UBQLNLQ8IYU4 475 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 MAFAQ8NHW3 353 aaPredicted RBP13.71□□□□□ -0.21
CDH1-213ENST00000612417 PATE1Q8WXA2 126 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 GIMAP5Q96F15 307 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 KCTD7Q96MP8 289 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 ORAI3Q9BRQ5 295 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 SYNPO2LQ9H987 977 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 CTPS2Q9NRF8 586 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 NTMQ9P121 344 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 APOBEC3BQ9UH17 382 aaKnown RBP13.71□□□□□ -0.21
CDH1-213ENST00000612417 SLC13A4Q9UKG4 626 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 CARD8Q9Y2G2 431 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 SIT1Q9Y3P8 196 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 A0A1W2PS29 197 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 METTL12A8MUP2 240 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 SEC14L5O43304 696 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 CELA2BP08218 269 aaPredicted RBP13.71□□□□□ -0.21
CDH1-213ENST00000612417 C8orf89P0DMQ9 161 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 GAAP10253 952 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 IL7P13232 177 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 CD27P26842 260 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 FGF9P31371 208 aaPredicted RBP13.71□□□□□ -0.21
CDH1-213ENST00000612417 GABRA5P31644 462 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 HTR3AP46098 478 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 RFX2P48378 723 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 BLKP51451 505 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 OR2B6P58173 313 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 ZMAT1Q5H9K5 638 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 C22orf42Q6IC83 251 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 HEPHL1Q6MZM0 1159 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 ZNF544Q6NX49 715 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 ZNF730Q6ZMV8 503 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 SPATC1Q76KD6 591 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 PRICKLE2Q7Z3G6 844 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 NRARPQ7Z6K4 114 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 POGLUT1Q8NBL1 392 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 PIGXQ8TBF5 258 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 SLC9A6Q92581 669 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 ARHGAP9Q9BRR9 750 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 ACTRT3Q9BYD9 372 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 SEMA4GQ9NTN9 838 aa13.71□□□□□ -0.21
CDH1-213ENST00000612417 GPR55Q9Y2T6 319 aaPredicted RBP13.71□□□□□ -0.21
CDH1-213ENST00000612417 GSAPA4D1B5 854 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 SLC30A4O14863 429 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 LIMS3P0CW19 117 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 LIMS4P0CW20 117 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 FPR3P25089 353 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 IFNA8P32881 189 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 HNRNPA0Q13151 305 aaKnown RBP13.7□□□□□ -0.22
CDH1-213ENST00000612417 BAK1Q16611 211 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 DECR1Q16698 335 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 ARMC4Q5T2S8 1044 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 OR2G6Q5TZ20 316 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 XKRXQ6PP77 449 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 PARGQ86W56 976 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 VRK2Q86Y07 508 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 TOR1AIP2Q8NFQ8 470 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 OR9A2Q8NGT5 310 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 OR10G6Q8NH81 332 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 FAM174AQ8TBP5 190 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 ACOT11Q8WXI4 607 aaPredicted RBP13.7□□□□□ -0.22
CDH1-213ENST00000612417 UFD1Q92890 307 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 RFKQ969G6 155 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 KIAA1143Q96AT1 154 aaPredicted RBP13.7□□□□□ -0.22
CDH1-213ENST00000612417 ZG16BQ96DA0 208 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 SPACA7Q96KW9 195 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 MIXL1Q9H2W2 232 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 TPK1Q9H3S4 243 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 TRIM45Q9H8W5 580 aaPredicted RBP13.7□□□□□ -0.22
CDH1-213ENST00000612417 MED17Q9NVC6 651 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 IL20Q9NYY1 176 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 SNX7Q9UNH6 387 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 ZNF780BQ9Y6R6 833 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 BTN3A3O00478 584 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 KLF4O43474 513 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 ZIC2O95409 532 aaPredicted RBP13.7□□□□□ -0.22
CDH1-213ENST00000612417 CD38P28907 300 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 STAT5AP42229 794 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 CXCL12P48061 93 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 TGM4P49221 684 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 RPS25P62851 125 aaKnown RBP13.7□□□□□ -0.22
CDH1-213ENST00000612417 ASAH1Q13510 395 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 GPR18Q14330 331 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 C16orf62Q7Z3J2 963 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 CAMKK1Q8N5S9 505 aa13.7□□□□□ -0.22
CDH1-213ENST00000612417 OR6F1Q8NGZ6 308 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms