RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	LASP1	Q14847	261 aa	Known RBP	12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	SSX1	Q16384	188 aa		12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	PRAMEF8	Q5VWM4	474 aa		12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	PRAMEF7	Q5VXH5	474 aa		12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	C18orf63	Q68DL7	685 aa		12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	OGFOD3	Q6PK18	319 aa		12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	CD300LD	Q6UXZ3	194 aa		12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	CAMKV	Q8NCB2	501 aa		12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	BAHD1	Q8TBE0	780 aa	Predicted RBP	12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	OPALIN	Q96PE5	141 aa		12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	TWSG1	Q9GZX9	223 aa		12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	SLA2	Q9H6Q3	261 aa		12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	NCOR1	O75376	2440 aa		12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	NIN	Q8N4C6	2090 aa		12.96	□□□□□ -0.33
COPS7B-223	ENST00000611614	IQCM	A0A1B0GVH7	501 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	EMC8	O43402	210 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	EPPIN	O95925	133 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	RAB8A	P61006	207 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	RUNX1T1	Q06455	604 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	NCF4	Q15080	339 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	NDUFA9	Q16795	377 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	FBXO42	Q6P3S6	717 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	TMEM107	Q6UX40	140 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	NRARP	Q7Z6K4	114 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	FAM181A	Q8N9Y4	354 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	OR8J1	Q8NGP2	316 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	KLHL6	Q8WZ60	621 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	AHCYL2	Q96HN2	611 aa	Known RBP	12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	ST6GAL2	Q96JF0	529 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	PRRC1	Q96M27	445 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	PINK1	Q9BXM7	581 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	SEMA6C	Q9H3T2	930 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	TMEM74B	Q9NUR3	256 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	GIMAP4	Q9NUV9	329 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	C14orf119	Q9NWQ9	140 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	ERVK13-1	Q9NX77	482 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	DNAJC27	Q9NZQ0	273 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	PILRB	Q9UKJ0	227 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	POMT2	Q9UKY4	750 aa		12.96	□□□□□ -0.34
COPS7B-223	ENST00000611614	EML5	Q05BV3	1969 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	CASC3	O15234	703 aa	Known RBP	12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	PROM1	O43490	865 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	CFI	P05156	583 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	C8orf89	P0DMQ9	161 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	PVR	P15151	417 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	BUD31	P41223	144 aa	Predicted RBP	12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	PRR5	P85299	388 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	OCLN	Q16625	522 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	GPAT3	Q53EU6	434 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	C6orf132	Q5T0Z8	1188 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	MAML2	Q8IZL2	1156 aa	Predicted RBP	12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	TMEM105	Q8N8V8	129 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	OR4K5	Q8NGD3	323 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	OR6T1	Q8NGN1	323 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	OR9Q1	Q8NGQ5	310 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	C16orf58	Q96GQ5	468 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	TMEM80	Q96HE8	168 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	FCRL4	Q96PJ5	515 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	DEPDC7	Q96QD5	511 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	PHOX2B	Q99453	314 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	CCDC3	Q9BQI4	270 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	SYNPO2L	Q9H987	977 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	MAN2C1	Q9NTJ4	1040 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	LYAR	Q9NX58	379 aa	Known RBP	12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	RPL36	Q9Y3U8	105 aa	Known RBP	12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614		V9GYH0	126 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	HR	O43593	1189 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	TNNI3	P19429	210 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	ZNF10	P21506	573 aa	Predicted RBP	12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	MPI	P34949	423 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	CAPZB	P47756	277 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	SCN1B	Q07699	218 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	FCRL6	Q6DN72	434 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	RABEPK	Q7Z6M1	372 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	ZER1	Q7Z7L7	766 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	C17orf82	Q86X59	251 aa	Predicted RBP	12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	TCEANC	Q8N8B7	351 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	ASB15	Q8WXK1	588 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	TRIM63	Q969Q1	353 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	OR2A5	Q96R48	311 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	SLC22A4	Q9H015	551 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	HHATL	Q9HCP6	504 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	LRIT1	Q9P2V4	623 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	STUB1	Q9UNE7	303 aa		12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	LSM2	Q9Y333	95 aa	Known RBP	12.95	□□□□□ -0.34
COPS7B-223	ENST00000611614	VCAN	P13611	3396 aa		12.94	□□□□□ -0.34
COPS7B-223	ENST00000611614	FAM25A	B3EWG3	89 aa		12.94	□□□□□ -0.34
COPS7B-223	ENST00000611614	FAM25C	B3EWG5	89 aa		12.94	□□□□□ -0.34
COPS7B-223	ENST00000611614	FAM25G	B3EWG6	89 aa		12.94	□□□□□ -0.34
COPS7B-223	ENST00000611614	ZNF670-ZNF695	F2Z2N8	137 aa		12.94	□□□□□ -0.34
COPS7B-223	ENST00000611614	SSX4	O60224	188 aa		12.94	□□□□□ -0.34
COPS7B-223	ENST00000611614	TPST2	O60704	377 aa		12.94	□□□□□ -0.34
COPS7B-223	ENST00000611614	CTSV	O60911	334 aa		12.94	□□□□□ -0.34
COPS7B-223	ENST00000611614	NAT2	P11245	290 aa		12.94	□□□□□ -0.34
COPS7B-223	ENST00000611614	MMP11	P24347	488 aa		12.94	□□□□□ -0.34
COPS7B-223	ENST00000611614	PSMA1	P25786	263 aa	Known RBP	12.94	□□□□□ -0.34
COPS7B-223	ENST00000611614	PSPH	P78330	225 aa		12.94	□□□□□ -0.34
COPS7B-223	ENST00000611614	ASAH1	Q13510	395 aa		12.94	□□□□□ -0.34
COPS7B-223	ENST00000611614	CEBPE	Q15744	281 aa		12.94	□□□□□ -0.34
COPS7B-223	ENST00000611614	ZNF438	Q7Z4V0	828 aa		12.94	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms