RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 SKP1P63208 163 aa26.07■■□□□ 1.76
CSPG5-205ENST00000610462 ZNF155Q12901 538 aaPredicted RBP26.07■■□□□ 1.76
CSPG5-205ENST00000610462 SMAD2Q15796 467 aaKnown RBP26.07■■□□□ 1.76
CSPG5-205ENST00000610462 SLC36A4Q6YBV0 504 aa26.07■■□□□ 1.76
CSPG5-205ENST00000610462 MFSD4AQ8N468 514 aa26.07■■□□□ 1.76
CSPG5-205ENST00000610462 OSTF1Q92882 214 aa26.07■■□□□ 1.76
CSPG5-205ENST00000610462 CENPOQ9BU64 300 aa26.07■■□□□ 1.76
CSPG5-205ENST00000610462 LDHAL6BQ9BYZ2 381 aaPredicted RBP26.07■■□□□ 1.76
CSPG5-205ENST00000610462 NLGN3Q9NZ94 848 aa26.07■■□□□ 1.76
CSPG5-205ENST00000610462 DIMT1Q9UNQ2 313 aaKnown RBP26.07■■□□□ 1.76
CSPG5-205ENST00000610462 NPIPA5A0A0B4J1W7 369 aa26.06■■□□□ 1.76
CSPG5-205ENST00000610462 METTL15A6NJ78 407 aa26.06■■□□□ 1.76
CSPG5-205ENST00000610462 NPIPA7E9PJI5 369 aa26.06■■□□□ 1.76
CSPG5-205ENST00000610462 PIP5K1CO60331 668 aa26.06■■□□□ 1.76
CSPG5-205ENST00000610462 BRINP1O60477 761 aa26.06■■□□□ 1.76
CSPG5-205ENST00000610462 NPIPA8P0DM63 369 aa26.06■■□□□ 1.76
CSPG5-205ENST00000610462 GPR4P46093 362 aa26.06■■□□□ 1.76
CSPG5-205ENST00000610462 RAB15P59190 212 aa26.06■■□□□ 1.76
CSPG5-205ENST00000610462 KHDRBS1Q07666 443 aaKnown RBP eCLIP26.06■■□□□ 1.76
CSPG5-205ENST00000610462 SPHARQ15513 63 aa26.06■■□□□ 1.76
CSPG5-205ENST00000610462 SSX1Q16384 188 aa26.06■■□□□ 1.76
CSPG5-205ENST00000610462 GALNT12Q8IXK2 581 aa26.06■■□□□ 1.76
CSPG5-205ENST00000610462 POGLUT1Q8NBL1 392 aa26.06■■□□□ 1.76
CSPG5-205ENST00000610462 PROKR2Q8NFJ6 384 aa26.06■■□□□ 1.76
CSPG5-205ENST00000610462 OR52I1Q8NGK6 324 aa26.06■■□□□ 1.76
CSPG5-205ENST00000610462 SLC38A3Q99624 504 aa26.06■■□□□ 1.76
CSPG5-205ENST00000610462 MMP27Q9H306 513 aa26.06■■□□□ 1.76
CSPG5-205ENST00000610462 MRPS18AQ9NVS2 196 aaKnown RBP26.06■■□□□ 1.76
CSPG5-205ENST00000610462 MRPS17Q9Y2R5 130 aaKnown RBP26.06■■□□□ 1.76
CSPG5-205ENST00000610462 TMEM265A0A087WTH1 108 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 TRAPPC13A5PLN9 417 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 CDHR4A6H8M9 788 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 FOXS1O43638 330 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 RAB36O95755 333 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 BMP4P12644 408 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 MAOBP27338 520 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 ITGADQ13349 1161 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 CCDC85BQ15834 202 aaPredicted RBP26.05■■□□□ 1.76
CSPG5-205ENST00000610462 TBC1D25Q3MII6 688 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 ZNF404Q494X3 552 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 KLHL22Q53GT1 634 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 SOWAHCQ53LP3 525 aaPredicted RBP26.05■■□□□ 1.76
CSPG5-205ENST00000610462 CHRDL2Q6WN34 429 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 RBCK1Q9BYM8 510 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 PCED1AQ9H1Q7 454 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 KRCC1Q9NPI7 259 aaPredicted RBP26.05■■□□□ 1.76
CSPG5-205ENST00000610462 IL20Q9NYY1 176 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 HCN3Q9P1Z3 774 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 KNL1Q8NG31 2342 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 PRODHO43272 600 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 SOX30O94993 753 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 PRG2P13727 222 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 GNSP15586 552 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 RACK1P63244 317 aaKnown RBP26.05■■□□□ 1.76
CSPG5-205ENST00000610462 INAQ16352 499 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 BTLAQ7Z6A9 289 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 AMER2Q8N7J2 671 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 CADM4Q8NFZ8 388 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 PRSS27Q9BQR3 290 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 RNF167Q9H6Y7 350 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 HHATLQ9HCP6 504 aa26.05■■□□□ 1.76
CSPG5-205ENST00000610462 SNTNA6NMZ2 147 aa26.04■■□□□ 1.76
CSPG5-205ENST00000610462 S1PR1P21453 382 aa26.04■■□□□ 1.76
CSPG5-205ENST00000610462 HTR2AP28223 471 aa26.04■■□□□ 1.76
CSPG5-205ENST00000610462 NIPAL1Q6NVV3 410 aa26.04■■□□□ 1.76
CSPG5-205ENST00000610462 CCDC59Q9P031 241 aaKnown RBP26.04■■□□□ 1.76
CSPG5-205ENST00000610462 A3GALT2U3KPV4 340 aa26.04■■□□□ 1.76
CSPG5-205ENST00000610462 GKN3PP0CG01 181 aa26.03■■□□□ 1.76
CSPG5-205ENST00000610462 SLC13A2Q13183 592 aa26.03■■□□□ 1.76
CSPG5-205ENST00000610462 CLEC12AQ5QGZ9 265 aa26.03■■□□□ 1.76
CSPG5-205ENST00000610462 CYP4Z2PQ8N1L4 340 aa26.03■■□□□ 1.76
CSPG5-205ENST00000610462 LMF2Q9BU23 707 aaKnown RBP26.03■■□□□ 1.76
CSPG5-205ENST00000610462 PRO3102Q9H379 93 aa26.03■■□□□ 1.76
CSPG5-205ENST00000610462 MRPS33Q9Y291 106 aaKnown RBP26.03■■□□□ 1.76
CSPG5-205ENST00000610462 DNAH14Q0VDD8 3507 aa26.03■■□□□ 1.76
CSPG5-205ENST00000610462 IRGMA1A4Y4 181 aa26.03■■□□□ 1.76
CSPG5-205ENST00000610462 BLACEA4D250 179 aa26.03■■□□□ 1.76
CSPG5-205ENST00000610462 KDM4EB2RXH2 506 aaPredicted RBP26.03■■□□□ 1.76
CSPG5-205ENST00000610462 DSCR3O14972 297 aa26.03■■□□□ 1.76
CSPG5-205ENST00000610462 FMO6PO60774 539 aa26.03■■□□□ 1.76
CSPG5-205ENST00000610462 CTNSO60931 367 aa26.03■■□□□ 1.76
CSPG5-205ENST00000610462 SULT1C4O75897 302 aa26.03■■□□□ 1.76
CSPG5-205ENST00000610462 OR1Q1Q15612 314 aa26.03■■□□□ 1.76
CSPG5-205ENST00000610462 ZNF620Q6ZNG0 422 aa26.03■■□□□ 1.76
CSPG5-205ENST00000610462 C11orf74Q86VG3 221 aa26.03■■□□□ 1.76
CSPG5-205ENST00000610462 C17orf82Q86X59 251 aaPredicted RBP26.03■■□□□ 1.76
CSPG5-205ENST00000610462 CLDN22Q8N7P3 220 aa26.03■■□□□ 1.76
CSPG5-205ENST00000610462 OR4Q3Q8NH05 313 aa26.03■■□□□ 1.76
CSPG5-205ENST00000610462 PEX11GQ96HA9 241 aa26.03■■□□□ 1.76
CSPG5-205ENST00000610462 ZNF285Q96NJ3 590 aa26.03■■□□□ 1.76
CSPG5-205ENST00000610462 NXF2Q9GZY0 626 aaKnown RBP26.03■■□□□ 1.76
CSPG5-205ENST00000610462 GON4LQ3T8J9 2241 aa26.02■■□□□ 1.76
CSPG5-205ENST00000610462 MYL12BO14950 172 aa26.02■■□□□ 1.76
CSPG5-205ENST00000610462 KCNK2O95069 426 aa26.02■■□□□ 1.76
CSPG5-205ENST00000610462 GABRA4P48169 554 aa26.02■■□□□ 1.76
CSPG5-205ENST00000610462 GAS1P54826 345 aa26.02■■□□□ 1.76
CSPG5-205ENST00000610462 FAM53BQ14153 422 aa26.02■■□□□ 1.76
CSPG5-205ENST00000610462 ZNF595Q8IYB9 648 aa26.02■■□□□ 1.76
CSPG5-205ENST00000610462 ANKK1Q8NFD2 765 aa26.02■■□□□ 1.76
CSPG5-205ENST00000610462 ADAMTS18Q8TE60 1221 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms