RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 ACSS1Q9NUB1 689 aaPredicted RBP17.47■□□□□ 0.39
SGMS1-208ENST00000608287 C2orf72A6NCS6 295 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 RNF212BA8MTL3 300 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 ICOSLGO75144 302 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 TRAPPC6AO75865 159 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 PSMG1O95456 288 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 IFI6P09912 130 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 TRPC1P48995 793 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 SLC18A1P54219 525 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 PNLIPRP2P54317 469 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 PRKAG1P54619 331 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 EMX2Q04743 252 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 SNTA1Q13424 505 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 EFR3AQ14156 821 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 TOMM20Q15388 145 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 FNDC7Q5VTL7 733 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 ANGPTL8Q6UXH0 198 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 KRTCAP2Q8N6L1 136 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 OR1J4Q8NGS1 313 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 EFHD2Q96C19 240 aaPredicted RBP17.46■□□□□ 0.39
SGMS1-208ENST00000608287 DACH2Q96NX9 599 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 SLC6A15Q9H2J7 730 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 AKTIPQ9H8T0 292 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 Q9N2J8 555 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 ACKR4Q9NPB9 350 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 PNPOQ9NVS9 261 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 NOP53Q9NZM5 478 aaKnown RBP17.46■□□□□ 0.39
SGMS1-208ENST00000608287 HAO1Q9UJM8 370 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 C15orf41Q9Y2V0 281 aa17.46■□□□□ 0.39
SGMS1-208ENST00000608287 SMAD7O15105 426 aaKnown RBP17.45■□□□□ 0.38
SGMS1-208ENST00000608287 IFNA2P01563 188 aa17.45■□□□□ 0.38
SGMS1-208ENST00000608287 HRGP04196 525 aa17.45■□□□□ 0.38
SGMS1-208ENST00000608287 LAMP1P11279 417 aa17.45■□□□□ 0.38
SGMS1-208ENST00000608287 G6PDP11413 515 aa17.45■□□□□ 0.38
SGMS1-208ENST00000608287 PRPS1L1P21108 318 aa17.45■□□□□ 0.38
SGMS1-208ENST00000608287 CEACAM8P31997 349 aaPredicted RBP17.45■□□□□ 0.38
SGMS1-208ENST00000608287 PTGDSP41222 190 aa17.45■□□□□ 0.38
SGMS1-208ENST00000608287 GAB1Q13480 694 aa17.45■□□□□ 0.38
SGMS1-208ENST00000608287 SMU1Q2TAY7 513 aa17.45■□□□□ 0.38
SGMS1-208ENST00000608287 CYP27C1Q4G0S4 372 aa17.45■□□□□ 0.38
SGMS1-208ENST00000608287 CPTPQ5TA50 214 aa17.45■□□□□ 0.38
SGMS1-208ENST00000608287 TIGD3Q6B0B8 471 aa17.45■□□□□ 0.38
SGMS1-208ENST00000608287 NUP43Q8NFH3 380 aa17.45■□□□□ 0.38
SGMS1-208ENST00000608287 CEP70Q8NHQ1 597 aa17.45■□□□□ 0.38
SGMS1-208ENST00000608287 NEIL3Q8TAT5 605 aa17.45■□□□□ 0.38
SGMS1-208ENST00000608287 PRPF18Q99633 342 aaKnown RBP17.45■□□□□ 0.38
SGMS1-208ENST00000608287 NUF2Q9BZD4 464 aa17.45■□□□□ 0.38
SGMS1-208ENST00000608287 C3orf14Q9HBI5 128 aa17.45■□□□□ 0.38
SGMS1-208ENST00000608287 ATAD3AQ9NVI7 634 aa17.45■□□□□ 0.38
SGMS1-208ENST00000608287 CHD3Q12873 2000 aaKnown RBP17.45■□□□□ 0.38
SGMS1-208ENST00000608287 A0A1W2PRB8 838 aa17.44■□□□□ 0.38
SGMS1-208ENST00000608287 CASKO14936 926 aa17.44■□□□□ 0.38
SGMS1-208ENST00000608287 EPPINO95925 133 aa17.44■□□□□ 0.38
SGMS1-208ENST00000608287 FPR1P21462 350 aa17.44■□□□□ 0.38
SGMS1-208ENST00000608287 OPRM1P35372 400 aa17.44■□□□□ 0.38
SGMS1-208ENST00000608287 MRPS22P82650 360 aaKnown RBP17.44■□□□□ 0.38
SGMS1-208ENST00000608287 DECR1Q16698 335 aa17.44■□□□□ 0.38
SGMS1-208ENST00000608287 AGBL2Q5U5Z8 902 aa17.44■□□□□ 0.38
SGMS1-208ENST00000608287 ATG16L1Q676U5 607 aa17.44■□□□□ 0.38
SGMS1-208ENST00000608287 YTHDF3Q7Z739 585 aaKnown RBP17.44■□□□□ 0.38
SGMS1-208ENST00000608287 PM20D2Q8IYS1 436 aa17.44■□□□□ 0.38
SGMS1-208ENST00000608287 NTNG2Q96CW9 530 aa17.44■□□□□ 0.38
SGMS1-208ENST00000608287 LMF2Q9BU23 707 aaKnown RBP17.44■□□□□ 0.38
SGMS1-208ENST00000608287 UBQLN3Q9H347 655 aa17.44■□□□□ 0.38
SGMS1-208ENST00000608287 THAP1Q9NVV9 213 aa17.44■□□□□ 0.38
SGMS1-208ENST00000608287 ASIC5Q9NY37 505 aa17.44■□□□□ 0.38
SGMS1-208ENST00000608287 SPRR3Q9UBC9 169 aa17.44■□□□□ 0.38
SGMS1-208ENST00000608287 ADAM21Q9UKJ8 722 aa17.44■□□□□ 0.38
SGMS1-208ENST00000608287 MAPRE3Q9UPY8 281 aa17.44■□□□□ 0.38
SGMS1-208ENST00000608287 FREM3P0C091 2139 aa17.44■□□□□ 0.38
SGMS1-208ENST00000608287 SNPHO15079 494 aa17.43■□□□□ 0.38
SGMS1-208ENST00000608287 EMC8O43402 210 aa17.43■□□□□ 0.38
SGMS1-208ENST00000608287 CRLF1O75462 422 aa17.43■□□□□ 0.38
SGMS1-208ENST00000608287 HPNP05981 417 aa17.43■□□□□ 0.38
SGMS1-208ENST00000608287 CYP4B1P13584 511 aa17.43■□□□□ 0.38
SGMS1-208ENST00000608287 ENDOUP21128 410 aaKnown RBP17.43■□□□□ 0.38
SGMS1-208ENST00000608287 PTPN6P29350 595 aa17.43■□□□□ 0.38
SGMS1-208ENST00000608287 GABRA3P34903 492 aa17.43■□□□□ 0.38
SGMS1-208ENST00000608287 RFX3P48380 749 aa17.43■□□□□ 0.38
SGMS1-208ENST00000608287 MLC1Q15049 377 aa17.43■□□□□ 0.38
SGMS1-208ENST00000608287 TRIM42Q8IWZ5 723 aa17.43■□□□□ 0.38
SGMS1-208ENST00000608287 RIMKLAQ8IXN7 391 aa17.43■□□□□ 0.38
SGMS1-208ENST00000608287 CIARTQ8N365 385 aaPredicted RBP17.43■□□□□ 0.38
SGMS1-208ENST00000608287 LINC01560Q8TB33 94 aa17.43■□□□□ 0.38
SGMS1-208ENST00000608287 GPR151Q8TDV0 419 aa17.43■□□□□ 0.38
SGMS1-208ENST00000608287 SLC9A6Q92581 669 aa17.43■□□□□ 0.38
SGMS1-208ENST00000608287 ARL8AQ96BM9 186 aa17.43■□□□□ 0.38
SGMS1-208ENST00000608287 COQ8BQ96D53 544 aa17.43■□□□□ 0.38
SGMS1-208ENST00000608287 MS4A4EQ96PG1 132 aa17.43■□□□□ 0.38
SGMS1-208ENST00000608287 MRTO4Q9UKD2 239 aaKnown RBP17.43■□□□□ 0.38
SGMS1-208ENST00000608287 SNX8Q9Y5X2 465 aa17.43■□□□□ 0.38
SGMS1-208ENST00000608287 C15orf38-AP3S2A0A0A6YYH1 394 aa17.42■□□□□ 0.38
SGMS1-208ENST00000608287 TTC36A6NLP5 189 aa17.42■□□□□ 0.38
SGMS1-208ENST00000608287 EEF1E1-BLOC1S5C9J1V9 151 aa17.42■□□□□ 0.38
SGMS1-208ENST00000608287 EEF1E1O43324 174 aaKnown RBP17.42■□□□□ 0.38
SGMS1-208ENST00000608287 SNNO75324 88 aaPredicted RBP17.42■□□□□ 0.38
SGMS1-208ENST00000608287 DIO3P55073 304 aa17.42■□□□□ 0.38
SGMS1-208ENST00000608287 CLDN8P56748 225 aa17.42■□□□□ 0.38
SGMS1-208ENST00000608287 PRR5P85299 388 aa17.42■□□□□ 0.38
SGMS1-208ENST00000608287 PGS1Q32NB8 556 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms