RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 PGS1Q32NB8 556 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 GLYR1Q49A26 553 aaPredicted RBP13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 DCST1Q5T197 706 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 ARSKQ6UWY0 536 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 MARCH3Q86UD3 253 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 GRAMD2AQ8IUY3 354 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 LIX1LQ8IVB5 337 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 LRRC34Q8IZ02 419 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 ZNF295-AS1Q8N0V1 137 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 ZNF781Q8N8C0 355 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 ANKRD42Q8N9B4 389 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 FADS6Q8N9I5 356 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 ZNF527Q8NB42 609 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 ACBD4Q8NC06 268 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 OR2M3Q8NG83 312 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 MBD3L2Q8NHZ7 208 aaPredicted RBP13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 HOXB13Q92826 284 aaPredicted RBP13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 RNASE6Q93091 150 aaKnown RBP13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 WNT2BQ93097 391 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 COQ8BQ96D53 544 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 FAM120BQ96EK7 910 aaKnown RBP13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 STACQ99469 402 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 TUBA1CQ9BQE3 449 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 BTBD2Q9BX70 525 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 HOXD1Q9GZZ0 328 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 UBQLN4Q9NRR5 601 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 DUSP22Q9NRW4 184 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 GIN1Q9NXP7 522 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 ASIC5Q9NY37 505 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 MED11Q9P086 117 aa13.07□□□□□ -0.32
PKNOX1-210ENST00000607049 MYO9AB2RTY4 2548 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 A0A087WZY1 265 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 DUXAA6NLW8 204 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 EEF1E1-BLOC1S5C9J1V9 151 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 EEF1E1O43324 174 aaKnown RBP13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 ITM2AO43736 263 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 ZIC3O60481 467 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 KCNK2O95069 426 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 DHRS4L1P0CG22 281 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 EFNA1P20827 205 aaPredicted RBP13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 TBXA2RP21731 343 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 BGNP21810 368 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 ARRB2P32121 409 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 KIR2DL3P43628 341 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 DIO3P55073 304 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 CLDN8P56748 225 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 RPS3AP61247 264 aaKnown RBP13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 LASP1Q14847 261 aaKnown RBP13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 DUSP5Q16690 384 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 GRAMD1BQ3KR37 738 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 ATG16L1Q676U5 607 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 OR2A2Q6IF42 318 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 FIGNL1Q6PIW4 674 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 SEM1Q6ZVN7 128 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 SLC16A11Q8NCK7 471 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 FBXO30Q8TB52 745 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 SFXN5Q8TD22 340 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 PPP1R36Q96LQ0 422 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 YIPF4Q9BSR8 244 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 SFXN3Q9BWM7 321 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 ACTRT3Q9BYD9 372 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 DPY30Q9C005 99 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 PIGUQ9H490 435 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 AKTIPQ9H8T0 292 aa13.06□□□□□ -0.32
PKNOX1-210ENST00000607049 ABCA12Q86UK0 2595 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 CLCA1A8K7I4 914 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 ALG1L2C9J202 215 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 RCBTB2O95199 551 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 C6orf47O95873 294 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 ACP2P11117 423 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 ZNF708P17019 499 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 LBPP18428 481 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 SOAT1P35610 550 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 MAP3K8P41279 467 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 STARP49675 285 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 LHX2P50458 406 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 ZNF41P51814 821 aaPredicted RBP13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 CLNS1AP54105 237 aaKnown RBP13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 C21orf58P58505 322 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 DPY19L1Q2PZI1 675 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 TNFAIP8L3Q5GJ75 292 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 ANXA8L1Q5VT79 327 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 CDC73Q6P1J9 531 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 TMEM200AQ86VY9 491 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 UBQLNLQ8IYU4 475 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 KRTCAP2Q8N6L1 136 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 PSMA8Q8TAA3 256 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 C1GALT1C1Q96EU7 318 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 GIMAP5Q96F15 307 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 C16orf58Q96GQ5 468 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 UCN2Q96RP3 112 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 PIGMQ9H3S5 423 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 EDARQ9UNE0 448 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 AP4B1Q9Y6B7 739 aa13.05□□□□□ -0.32
PKNOX1-210ENST00000607049 EXPH5Q8NEV8 1989 aa13.04□□□□□ -0.32
PKNOX1-210ENST00000607049 UQCRHLA0A096LP55 91 aa13.04□□□□□ -0.32
PKNOX1-210ENST00000607049 IGLV3-32A0A0A0MS00 114 aa13.04□□□□□ -0.32
PKNOX1-210ENST00000607049 TMEM120BA0PK00 339 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms