RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 CPOXP36551 454 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 CD79BP40259 229 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 FRKP42685 505 aaPredicted RBP6.86□□□□□ -1.31
CUX1-219ENST00000606749 PRKAG1P54619 331 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 MANFP55145 182 aaKnown RBP6.86□□□□□ -1.31
CUX1-219ENST00000606749 CLDN20P56880 219 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 OCRLQ01968 901 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 HSPB3Q12988 150 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 PON3Q15166 354 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 GRAMD1BQ3KR37 738 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 KRTAP21-3Q3LHN1 58 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 UGT3A2Q3SY77 523 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 ZNF385BQ569K4 471 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 RNF165Q6ZSG1 346 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 EXOC3L1Q86VI1 746 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 METTL25Q8N6Q8 603 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 ZNF610Q8N9Z0 462 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 SLC16A11Q8NCK7 471 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 NUP43Q8NFH3 380 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 CEP70Q8NHQ1 597 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 FNDC9Q8TBE3 224 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 FAM110BQ8TC76 370 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 GPR151Q8TDV0 419 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 EPS8L3Q8TE67 593 aaKnown RBP6.86□□□□□ -1.31
CUX1-219ENST00000606749 PPCDCQ96CD2 204 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 GIMAP5Q96F15 307 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 ZBED6CLQ96FA7 236 aaPredicted RBP6.86□□□□□ -1.31
CUX1-219ENST00000606749 ZNF764Q96H86 408 aaPredicted RBP6.86□□□□□ -1.31
CUX1-219ENST00000606749 POM121Q96HA1 1249 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 ZNF845Q96IR2 970 aaPredicted RBP6.86□□□□□ -1.31
CUX1-219ENST00000606749 FCRL1Q96LA6 429 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 TSSK3Q96PN8 268 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 FAM111AQ96PZ2 611 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 SLC39A3Q9BRY0 314 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 GATA5Q9BWX5 397 aaPredicted RBP6.86□□□□□ -1.31
CUX1-219ENST00000606749 TBL1XR1Q9BZK7 514 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 OPN3Q9H1Y3 402 aaPredicted RBP6.86□□□□□ -1.31
CUX1-219ENST00000606749 GSX1Q9H4S2 264 aaPredicted RBP6.86□□□□□ -1.31
CUX1-219ENST00000606749 REEP4Q9H6H4 257 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 NEUROD4Q9HD90 331 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 EQTNQ9NQ60 294 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 ACSS1Q9NUB1 689 aaPredicted RBP6.86□□□□□ -1.31
CUX1-219ENST00000606749 ELOVL5Q9NYP7 299 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 C6orf203Q9P0P8 240 aaPredicted RBP6.86□□□□□ -1.31
CUX1-219ENST00000606749 SH3BP4Q9P0V3 963 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 EIF3LQ9Y262 564 aaKnown RBP6.86□□□□□ -1.31
CUX1-219ENST00000606749 ZNF175Q9Y473 711 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 TESMINQ9Y4I5 508 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 DNAJC15Q9Y5T4 150 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 ABCA4P78363 2273 aa6.86□□□□□ -1.31
CUX1-219ENST00000606749 ZNF469Q96JG9 3925 aaPredicted RBP6.86□□□□□ -1.31
CUX1-219ENST00000606749 DEFB108AA8MXU0 73 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 SHISA8B8ZZ34 492 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 ALG1L2C9J202 215 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 C16orf97H3BN30 126 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 LSM1O15116 133 aaKnown RBP6.85□□□□□ -1.31
CUX1-219ENST00000606749 PDPK1O15530 556 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 SIAH2O43255 324 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 SEC14L5O43304 696 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 NDUFB5O43674 189 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 GMFGO60234 142 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 AQP8O94778 261 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 KCNK2O95069 426 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 NGFRP08138 427 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 ACP2P11117 423 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 HOXB4P17483 251 aaPredicted RBP6.85□□□□□ -1.31
CUX1-219ENST00000606749 SDC1P18827 310 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 TBXA2RP21731 343 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 ALDH3A1P30838 453 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 GPC1P35052 558 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 UGT2B10P36537 528 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 SLC6A8P48029 635 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 SIRPAP78324 504 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 PDE7AQ13946 482 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 PCLAFQ15004 111 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 GUSBP1Q15486 140 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 SGCBQ16585 318 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.85□□□□□ -1.31
CUX1-219ENST00000606749 VPS26BQ4G0F5 336 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 KANK2Q63ZY3 851 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 ZCCHC12Q6PEW1 402 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 C22orf34Q6ZV56 151 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 GALNT10Q86SR1 603 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 CXorf67Q86X51 503 aaPredicted RBP6.85□□□□□ -1.31
CUX1-219ENST00000606749 C4orf33Q8N1A6 199 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 CDRT4Q8N9R6 151 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 WFDC11Q8NEX6 87 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 CLHC1Q8NHS4 586 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 ZFP28Q8NHY6 868 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 SLC9A6Q92581 669 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 C16orf58Q96GQ5 468 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 NPAS1Q99742 590 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 CCT7Q99832 543 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 TRMOQ9BU70 441 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 IQCGQ9H095 443 aaKnown RBP6.85□□□□□ -1.31
CUX1-219ENST00000606749 PLSCR4Q9NRQ2 329 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 BEX4Q9NWD9 120 aaPredicted RBP6.85□□□□□ -1.31
CUX1-219ENST00000606749 FBXO34Q9NWN3 711 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 KLHL28Q9NXS3 571 aa6.85□□□□□ -1.31
CUX1-219ENST00000606749 ZNF226Q9NYT6 803 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms