RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 TMEM81Q6P7N7 255 aa13.18□□□□□ -0.3
UPF1-211ENST00000600868 RTL4Q6ZR62 310 aa13.18□□□□□ -0.3
UPF1-211ENST00000600868 PEX5LQ8IYB4 626 aa13.18□□□□□ -0.3
UPF1-211ENST00000600868 CYP4Z2PQ8N1L4 340 aa13.18□□□□□ -0.3
UPF1-211ENST00000600868 FAM13CQ8NE31 585 aa13.18□□□□□ -0.3
UPF1-211ENST00000600868 OR10G3Q8NGC4 313 aa13.18□□□□□ -0.3
UPF1-211ENST00000600868 OR4C3Q8NH37 302 aa13.18□□□□□ -0.3
UPF1-211ENST00000600868 SPPL2AQ8TCT8 520 aa13.18□□□□□ -0.3
UPF1-211ENST00000600868 FIG4Q92562 907 aa13.18□□□□□ -0.3
UPF1-211ENST00000600868 UTP4Q969X6 686 aaKnown RBP13.18□□□□□ -0.3
UPF1-211ENST00000600868 ASB9Q96DX5 294 aa13.18□□□□□ -0.3
UPF1-211ENST00000600868 SPATA5L1Q9BVQ7 753 aa13.18□□□□□ -0.3
UPF1-211ENST00000600868 PCDHAC1Q9H158 963 aa13.18□□□□□ -0.3
UPF1-211ENST00000600868 GORASP2Q9H8Y8 452 aa13.18□□□□□ -0.3
UPF1-211ENST00000600868 SLC7A8Q9UHI5 535 aa13.18□□□□□ -0.3
UPF1-211ENST00000600868 KCNE5Q9UJ90 142 aa13.18□□□□□ -0.3
UPF1-211ENST00000600868 ABCG2Q9UNQ0 655 aa13.18□□□□□ -0.3
UPF1-211ENST00000600868 IFT52Q9Y366 437 aa13.18□□□□□ -0.3
UPF1-211ENST00000600868 CHCHD2Q9Y6H1 151 aaPredicted RBP13.18□□□□□ -0.3
UPF1-211ENST00000600868 CFAP47Q6ZTR5 3102 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 NPIPA5A0A0B4J1W7 369 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 OR5H15A6NDH6 313 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 NPIPA7E9PJI5 369 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 MKRN2OSH3BPM6 223 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 M0QX08 132 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 ARPC2O15144 300 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 FADS1O60427 444 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 MFN2O95140 757 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 OXSR1O95747 527 aaPredicted RBP13.17□□□□□ -0.3
UPF1-211ENST00000600868 IFNA14P01570 189 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 DBIP07108 87 aaKnown RBP13.17□□□□□ -0.3
UPF1-211ENST00000600868 THBS1P07996 1170 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 NPIPA8P0DM63 369 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 NCK1P16333 377 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 ST13P50502 369 aaKnown RBP13.17□□□□□ -0.3
UPF1-211ENST00000600868 POLE2P56282 527 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 KCNJ2P63252 427 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 MS4A2Q01362 244 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 OC90Q02509 493 aaPredicted RBP13.17□□□□□ -0.3
UPF1-211ENST00000600868 ELOAQ14241 798 aaKnown RBP13.17□□□□□ -0.3
UPF1-211ENST00000600868 KLHL26Q53HC5 615 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 SLC22A10Q63ZE4 541 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 IGFL3Q6UXB1 125 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 ZNF227Q86WZ6 799 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 ZNF527Q8NB42 609 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 OR52E4Q8NGH9 312 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 OR5M3Q8NGP4 307 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 PAQR8Q8TEZ7 354 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 EXTL1Q92935 676 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 CCDC124Q96CT7 223 aaKnown RBP13.17□□□□□ -0.3
UPF1-211ENST00000600868 NODALQ96S42 347 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 QRSL1Q9H0R6 528 aaKnown RBP13.17□□□□□ -0.3
UPF1-211ENST00000600868 CACYBPQ9HB71 228 aaKnown RBP13.17□□□□□ -0.3
UPF1-211ENST00000600868 ANKRD10Q9NXR5 420 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 PLA2G3Q9NZ20 509 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 FLRT3Q9NZU0 649 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 CNIH4Q9P003 139 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 ACTR3BQ9P1U1 418 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 LRFN1Q9P244 771 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 POMPQ9Y244 141 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 DTNAQ9Y4J8 743 aa13.17□□□□□ -0.3
UPF1-211ENST00000600868 A0A1W2PQD3 144 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 ANKRD33BA6NCL7 494 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 CFAP73A6NFT4 308 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 ALG1L2C9J202 215 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 SCDO00767 359 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 ACOT8O14734 319 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 NEURL1O76050 574 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 NID1P14543 1247 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 HPGDP15428 266 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 NQO1P15559 274 aaKnown RBP13.16□□□□□ -0.3
UPF1-211ENST00000600868 EVI2BP34910 448 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 ADH7P40394 386 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 CRYBA2P53672 197 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 ARG2P78540 354 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 SNTA1Q13424 505 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 OR1C1Q15619 314 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 MAPK14Q16539 360 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 ZSWIM7Q19AV6 140 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 PDZK1Q5T2W1 519 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 LCN8Q6JVE9 175 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 DHFR2Q86XF0 187 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 ARMC8Q8IUR7 673 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 POGLUT1Q8NBL1 392 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 MDS2Q8NDY4 140 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 BHLHE22Q8NFJ8 381 aaPredicted RBP13.16□□□□□ -0.3
UPF1-211ENST00000600868 OR52P1PQ8NH57 321 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 GRHL3Q8TE85 626 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 RASSF5Q8WWW0 418 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 TM9SF4Q92544 642 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 FAM162AQ96A26 154 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 TAMM41Q96BW9 452 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 NTNG2Q96CW9 530 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 RAB3IPQ96QF0 476 aaPredicted RBP13.16□□□□□ -0.3
UPF1-211ENST00000600868 TIMMDC1Q9NPL8 285 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 ZNF232Q9UNY5 417 aa13.16□□□□□ -0.3
UPF1-211ENST00000600868 CENPVL1A0A0U1RR11 272 aa13.15□□□□□ -0.3
UPF1-211ENST00000600868 PRAMEF25A6NGN4 478 aa13.15□□□□□ -0.3
UPF1-211ENST00000600868 SERINC4A6NH21 518 aa13.15□□□□□ -0.3
UPF1-211ENST00000600868 STAMBPO95630 424 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms