RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 HEPHL1Q6MZM0 1159 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 CLECL1Q8IZS7 167 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 ZPLD1Q8TCW7 415 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 CKAP2Q8WWK9 683 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 PPP1R36Q96LQ0 422 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 TTYH2Q9BSA4 534 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 UGT2B28Q9BY64 529 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 DPY30Q9C005 99 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 SAP130Q9H0E3 1048 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 ZCCHC3Q9NUD5 404 aaKnown RBP7.98□□□□□ -1.13
SSBP4-208ENST00000600628 ARGLU1Q9NWB6 273 aaPredicted RBP7.98□□□□□ -1.13
SSBP4-208ENST00000600628 KLRF1Q9NZS2 232 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 ZIM2Q9NZV7 527 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 TNFRSF10DQ9UBN6 386 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 OR10H1Q9Y4A9 318 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 GMEB1Q9Y692 573 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 KCNE3Q9Y6H6 103 aa7.98□□□□□ -1.13
SSBP4-208ENST00000600628 POLQO75417 2590 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 VPS13CQ709C8 3753 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 PRAMEF27A3QJZ7 478 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 C7orf72A4D263 438 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 CD8B2A6NJW9 211 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 FIGNL2A6NMB9 653 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 AHRRA9YTQ3 701 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 KDM4EB2RXH2 506 aaPredicted RBP7.97□□□□□ -1.13
SSBP4-208ENST00000600628 GNB5O14775 395 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 HNRNPRO43390 633 aaKnown RBP7.97□□□□□ -1.13
SSBP4-208ENST00000600628 TOXO94900 526 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 KCNH1O95259 989 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 UTS2O95399 124 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 CLDN14O95500 239 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 EPPINO95925 133 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 C1QCP02747 245 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 PGRP06401 933 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 NID1P14543 1247 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 IDO1P14902 403 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 GPC1P35052 558 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 TIMP3P35625 211 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 ADH7P40394 386 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 PRIM2P49643 509 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 CLDN15P56746 228 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 CLDN18P56856 261 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 PPP2R2AP63151 447 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 GANABQ14697 944 aaKnown RBP7.97□□□□□ -1.13
SSBP4-208ENST00000600628 LASP1Q14847 261 aaKnown RBP7.97□□□□□ -1.13
SSBP4-208ENST00000600628 BCL2A1Q16548 175 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 GSTA3Q16772 222 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 FAM174BQ3ZCQ3 159 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 GLYR1Q49A26 553 aaPredicted RBP7.97□□□□□ -1.13
SSBP4-208ENST00000600628 WIPI1Q5MNZ9 446 aaPredicted RBP7.97□□□□□ -1.13
SSBP4-208ENST00000600628 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.97□□□□□ -1.138e-6■■■■■ 27.9
SSBP4-208ENST00000600628 TMEM211Q6ICI0 200 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 MSANTD1Q6ZTZ1 278 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 C6orf120Q7Z4R8 191 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 GLB1L3Q8NCI6 653 aaPredicted RBP7.97□□□□□ -1.13
SSBP4-208ENST00000600628 LILRB4Q8NHJ6 448 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 GPR151Q8TDV0 419 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 OIT3Q8WWZ8 545 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 NEURL3Q96EH8 262 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 RMND5BQ96G75 393 aaPredicted RBP7.97□□□□□ -1.13
SSBP4-208ENST00000600628 MAGEB18Q96M61 343 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 JSRP1Q96MG2 331 aaPredicted RBP7.97□□□□□ -1.13
SSBP4-208ENST00000600628 SDF2Q99470 211 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 KLHDC3Q9BQ90 382 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 NMUR2Q9GZQ4 415 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 ENKD1Q9H0I2 346 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 ZNF385DQ9H6B1 395 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 LDAHQ9H6V9 325 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 CHST11Q9NPF2 352 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 EQTNQ9NQ60 294 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 UBQLN4Q9NRR5 601 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 TMEM45AQ9NWC5 275 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 MARCOQ9UEW3 520 aaPredicted RBP7.97□□□□□ -1.13
SSBP4-208ENST00000600628 KCNE5Q9UJ90 142 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 MRTO4Q9UKD2 239 aaKnown RBP7.97□□□□□ -1.13
SSBP4-208ENST00000600628 USH1CQ9Y6N9 552 aa7.97□□□□□ -1.13
SSBP4-208ENST00000600628 SPG11Q96JI7 2443 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 GOLGA8QA0A0J9YX86 632 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 GOLGA8OA6NCC3 632 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 MBD3L4A6NDZ8 208 aaPredicted RBP7.96□□□□□ -1.14
SSBP4-208ENST00000600628 MBD3L3A6NE82 208 aaPredicted RBP7.96□□□□□ -1.14
SSBP4-208ENST00000600628 MBD3L5A6NJ08 208 aaPredicted RBP7.96□□□□□ -1.14
SSBP4-208ENST00000600628 GOLGA8NF8WBI6 632 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 HCRTR2O43614 444 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 NTN1O95631 604 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 ANGPTL1O95841 491 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 KRT16P08779 473 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 ALOX5P09917 674 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 ZCCHC18P0CG32 403 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 ZNF708P17019 499 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 UQCRC2P22695 453 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 MSX1P28360 303 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 KRT20P35900 424 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 MAGEA8P43361 318 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 MASP1P48740 699 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 TRPC1P48995 793 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 IDH3AP50213 366 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 PRKAG1P54619 331 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 DLX5P56178 289 aa7.96□□□□□ -1.14
SSBP4-208ENST00000600628 DSCR4P56555 118 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms