RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 GFM2Q969S9 779 aaKnown RBP12.53□□□□□ -0.4
IRF3-225ENST00000600022 SARAFQ96BY9 339 aa12.53□□□□□ -0.4
IRF3-225ENST00000600022 PPCDCQ96CD2 204 aa12.53□□□□□ -0.4
IRF3-225ENST00000600022 EGLN2Q96KS0 407 aa12.53□□□□□ -0.4
IRF3-225ENST00000600022 FAIM2Q9BWQ8 316 aa12.53□□□□□ -0.4
IRF3-225ENST00000600022 DENND2DQ9H6A0 471 aaPredicted RBP12.53□□□□□ -0.4
IRF3-225ENST00000600022 REEP4Q9H6H4 257 aa12.53□□□□□ -0.4
IRF3-225ENST00000600022 ZFP64Q9NPA5 681 aa12.53□□□□□ -0.4
IRF3-225ENST00000600022 CBLCQ9ULV8 474 aa12.53□□□□□ -0.4
IRF3-225ENST00000600022 PCDHGB4Q9UN71 923 aa12.53□□□□□ -0.4
IRF3-225ENST00000600022 RPH3AQ9Y2J0 694 aaPredicted RBP12.53□□□□□ -0.4
IRF3-225ENST00000600022 CHCHD2Q9Y6H1 151 aaPredicted RBP12.53□□□□□ -0.4
IRF3-225ENST00000600022 A0A096LPI6 279 aa12.52□□□□□ -0.41
IRF3-225ENST00000600022 GLOD5A6NK44 160 aa12.52□□□□□ -0.41
IRF3-225ENST00000600022 RFXANKO14593 260 aa12.52□□□□□ -0.41
IRF3-225ENST00000600022 HCN1O60741 890 aa12.52□□□□□ -0.41
IRF3-225ENST00000600022 ATP6V1G2O95670 118 aa12.52□□□□□ -0.41
IRF3-225ENST00000600022 GBAP04062 536 aa12.52□□□□□ -0.41
IRF3-225ENST00000600022 BNIP2Q12982 314 aa12.52□□□□□ -0.41
IRF3-225ENST00000600022 FLOT2Q14254 428 aa12.52□□□□□ -0.41
IRF3-225ENST00000600022 SLC25A35Q3KQZ1 300 aa12.52□□□□□ -0.41
IRF3-225ENST00000600022 PAGE3Q5JUK9 113 aa12.52□□□□□ -0.41
IRF3-225ENST00000600022 FBXW10Q5XX13 1052 aa12.52□□□□□ -0.41
IRF3-225ENST00000600022 MRM1Q6IN84 353 aaKnown RBP12.52□□□□□ -0.41
IRF3-225ENST00000600022 OR8J2Q8NGG1 315 aa12.52□□□□□ -0.41
IRF3-225ENST00000600022 NEIL3Q8TAT5 605 aa12.52□□□□□ -0.41
IRF3-225ENST00000600022 SPACA9Q96E40 222 aaPredicted RBP12.52□□□□□ -0.41
IRF3-225ENST00000600022 LRGUKQ96M69 825 aa12.52□□□□□ -0.41
IRF3-225ENST00000600022 DGAT2Q96PD7 388 aa12.52□□□□□ -0.41
IRF3-225ENST00000600022 CGREF1Q99674 301 aa12.52□□□□□ -0.41
IRF3-225ENST00000600022 DUSP26Q9BV47 211 aa12.52□□□□□ -0.41
IRF3-225ENST00000600022 BHLHE41Q9C0J9 482 aaPredicted RBP12.52□□□□□ -0.41
IRF3-225ENST00000600022 MUC13Q9H3R2 512 aa12.52□□□□□ -0.41
IRF3-225ENST00000600022 LYARQ9NX58 379 aaKnown RBP12.52□□□□□ -0.41
IRF3-225ENST00000600022 SH3BP4Q9P0V3 963 aa12.52□□□□□ -0.41
IRF3-225ENST00000600022 TMEM181Q9P2C4 612 aa12.52□□□□□ -0.41
IRF3-225ENST00000600022 ATP6V1HQ9UI12 483 aa12.52□□□□□ -0.41
IRF3-225ENST00000600022 CNOT11Q9UKZ1 510 aaKnown RBP12.52□□□□□ -0.41
IRF3-225ENST00000600022 EXO1Q9UQ84 846 aaKnown RBP12.52□□□□□ -0.41
IRF3-225ENST00000600022 A6NNC1 897 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 TBX19O60806 448 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 FKBP6O75344 327 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 IL3P08700 152 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 CEACAM8P31997 349 aaPredicted RBP12.51□□□□□ -0.41
IRF3-225ENST00000600022 EEFSECP57772 596 aaKnown RBP12.51□□□□□ -0.41
IRF3-225ENST00000600022 ACTR3P61158 418 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 TRAP1Q12931 704 aaKnown RBP12.51□□□□□ -0.41
IRF3-225ENST00000600022 DUSP8Q13202 625 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 CAPRIN1Q14444 709 aaKnown RBP12.51□□□□□ -0.41
IRF3-225ENST00000600022 ZNF267Q14586 743 aaPredicted RBP12.51□□□□□ -0.41
IRF3-225ENST00000600022 FNDC7Q5VTL7 733 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 DESI1Q6ICB0 168 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 PLXDC2Q6UX71 529 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 WFDC11Q8NEX6 87 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 OR8J3Q8NGG0 315 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 LINC01560Q8TB33 94 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 NUBPLQ8TB37 319 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 NINJ1Q92982 152 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 ASB9Q96DX5 294 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 RBM18Q96H35 190 aaKnown RBP12.51□□□□□ -0.41
IRF3-225ENST00000600022 PANX1Q96RD7 426 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 GAL3ST4Q96RP7 486 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 TIMP4Q99727 224 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 KCTD14Q9BQ13 255 aaPredicted RBP12.51□□□□□ -0.41
IRF3-225ENST00000600022 RPF2Q9H7B2 306 aaKnown RBP12.51□□□□□ -0.41
IRF3-225ENST00000600022 DCLRE1BQ9H816 532 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 ACKR4Q9NPB9 350 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 EHD3Q9NZN3 535 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 COPS7AQ9UBW8 275 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 ERVK-19Q9WJR5 959 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 POMPQ9Y244 141 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 SLC6A5Q9Y345 797 aa12.51□□□□□ -0.41
IRF3-225ENST00000600022 MED12Q93074 2177 aa12.5□□□□□ -0.41
IRF3-225ENST00000600022 PRSS51A0A1B0GVH4 220 aa12.5□□□□□ -0.41
IRF3-225ENST00000600022 A0A1W2PR48 441 aa12.5□□□□□ -0.41
IRF3-225ENST00000600022 EVPLLA8MZ36 301 aa12.5□□□□□ -0.41
IRF3-225ENST00000600022 TRIM3O75382 744 aaPredicted RBP12.5□□□□□ -0.41
IRF3-225ENST00000600022 FBXO45P0C2W1 286 aa12.5□□□□□ -0.41
IRF3-225ENST00000600022 FAM58BPP0C7Q3 252 aa12.5□□□□□ -0.41
IRF3-225ENST00000600022 DRD2P14416 443 aa12.5□□□□□ -0.41
IRF3-225ENST00000600022 GABRA1P14867 456 aa12.5□□□□□ -0.41
IRF3-225ENST00000600022 DDCP20711 480 aa12.5□□□□□ -0.41
IRF3-225ENST00000600022 PPIBP23284 216 aaKnown RBP12.5□□□□□ -0.41
IRF3-225ENST00000600022 SLC6A2P23975 617 aa12.5□□□□□ -0.41
IRF3-225ENST00000600022 SOX18P35713 384 aa12.5□□□□□ -0.41
IRF3-225ENST00000600022 ZNF136P52737 540 aa12.5□□□□□ -0.41
IRF3-225ENST00000600022 SLC37A1P57057 533 aa12.5□□□□□ -0.41
IRF3-225ENST00000600022 FBXW4P57775 412 aa12.5□□□□□ -0.41
IRF3-225ENST00000600022 CRYZQ08257 329 aaKnown RBP12.5□□□□□ -0.41
IRF3-225ENST00000600022 CEACAM7Q14002 265 aa12.5□□□□□ -0.41
IRF3-225ENST00000600022 TRIM25Q14258 630 aaKnown RBP12.5□□□□□ -0.41
IRF3-225ENST00000600022 ACSF3Q4G176 576 aaPredicted RBP12.5□□□□□ -0.41
IRF3-225ENST00000600022 DCST1Q5T197 706 aa12.5□□□□□ -0.41
IRF3-225ENST00000600022 OR4F3Q6IEY1 312 aa12.5□□□□□ -0.41
IRF3-225ENST00000600022 C8orf82Q6P1X6 216 aaPredicted RBP12.5□□□□□ -0.41
IRF3-225ENST00000600022 TRIML2Q8N7C3 387 aa12.5□□□□□ -0.41
IRF3-225ENST00000600022 CHDHQ8NE62 594 aaPredicted RBP12.5□□□□□ -0.41
IRF3-225ENST00000600022 OR7A2PQ8NGA2 310 aa12.5□□□□□ -0.41
IRF3-225ENST00000600022 GTF2H4Q92759 462 aa12.5□□□□□ -0.41
IRF3-225ENST00000600022 TM4SF18Q96CE8 201 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms