RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 FAM120BQ96EK7 910 aaKnown RBP9.53□□□□□ -0.88
CCDC9-203ENST00000596938 LRRC46Q96FV0 321 aa9.53□□□□□ -0.88
CCDC9-203ENST00000596938 RMND5BQ96G75 393 aaPredicted RBP9.53□□□□□ -0.88
CCDC9-203ENST00000596938 C16orf58Q96GQ5 468 aa9.53□□□□□ -0.88
CCDC9-203ENST00000596938 PKNOX2Q96KN3 472 aa9.53□□□□□ -0.88
CCDC9-203ENST00000596938 SFXN2Q96NB2 322 aa9.53□□□□□ -0.88
CCDC9-203ENST00000596938 ZFP3Q96NJ6 502 aa9.53□□□□□ -0.88
CCDC9-203ENST00000596938 STACQ99469 402 aa9.53□□□□□ -0.88
CCDC9-203ENST00000596938 TM9SF2Q99805 663 aa9.53□□□□□ -0.88
CCDC9-203ENST00000596938 G6PC3Q9BUM1 346 aa9.53□□□□□ -0.88
CCDC9-203ENST00000596938 C1orf50Q9BV19 199 aa9.53□□□□□ -0.88
CCDC9-203ENST00000596938 TBL1XR1Q9BZK7 514 aa9.53□□□□□ -0.88
CCDC9-203ENST00000596938 BHLHE41Q9C0J9 482 aaPredicted RBP9.53□□□□□ -0.88
CCDC9-203ENST00000596938 C20orf27Q9GZN8 174 aa9.53□□□□□ -0.88
CCDC9-203ENST00000596938 CENPHQ9H3R5 247 aa9.53□□□□□ -0.88
CCDC9-203ENST00000596938 ZNF395Q9H8N7 513 aaPredicted RBP9.53□□□□□ -0.88
CCDC9-203ENST00000596938 KCNK9Q9NPC2 374 aa9.53□□□□□ -0.88
CCDC9-203ENST00000596938 DUSP22Q9NRW4 184 aa9.53□□□□□ -0.88
CCDC9-203ENST00000596938 NOP53Q9NZM5 478 aaKnown RBP9.53□□□□□ -0.88
CCDC9-203ENST00000596938 JKAMPQ9P055 326 aa9.53□□□□□ -0.88
CCDC9-203ENST00000596938 MED11Q9P086 117 aa9.53□□□□□ -0.88
CCDC9-203ENST00000596938 HAO1Q9UJM8 370 aa9.53□□□□□ -0.88
CCDC9-203ENST00000596938 DKKL1Q9UK85 242 aa9.53□□□□□ -0.88
CCDC9-203ENST00000596938 L3MBTL1Q9Y468 752 aa9.53□□□□□ -0.88
CCDC9-203ENST00000596938 EML6Q6ZMW3 1958 aa9.53□□□□□ -0.88
CCDC9-203ENST00000596938 NINQ8N4C6 2090 aa9.52□□□□□ -0.88
CCDC9-203ENST00000596938 C17orf51A8MQB3 221 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 H0Y3Z8 333 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 HMGN2P05204 90 aaKnown RBP9.52□□□□□ -0.89
CCDC9-203ENST00000596938 G6PDP11413 515 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 PEPDP12955 493 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 HK1P19367 917 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 RFX3P48380 749 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 CCT3P49368 545 aaKnown RBP9.52□□□□□ -0.89
CCDC9-203ENST00000596938 ASCL1P50553 236 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 DGKQP52824 942 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 SLC18A1P54219 525 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 WNT3P56703 355 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 EEFSECP57772 596 aaKnown RBP9.52□□□□□ -0.89
CCDC9-203ENST00000596938 KRTAP10-9P60411 292 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 SRYQ05066 204 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 STX3Q13277 289 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 DUSP5Q16690 384 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 TMEM44Q2T9K0 475 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 GRAMD1BQ3KR37 738 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 ZNF781Q8N8C0 355 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 C9orf106Q8NAJ2 232 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 RNASE6Q93091 150 aaKnown RBP9.52□□□□□ -0.89
CCDC9-203ENST00000596938 MOAP1Q96BY2 351 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 C1GALT1C1Q96EU7 318 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 SORT1Q99523 831 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 SH3GL2Q99962 352 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 ZNF559Q9BR84 538 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 BTBD2Q9BX70 525 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 ACTRT3Q9BYD9 372 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 ACBD3Q9H3P7 528 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 PIGUQ9H490 435 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 AKTIPQ9H8T0 292 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 UBQLN4Q9NRR5 601 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 ZCCHC3Q9NUD5 404 aaKnown RBP9.52□□□□□ -0.89
CCDC9-203ENST00000596938 RPH3AQ9Y2J0 694 aaPredicted RBP9.52□□□□□ -0.89
CCDC9-203ENST00000596938 PKDREJQ9NTG1 2253 aa9.52□□□□□ -0.89
CCDC9-203ENST00000596938 A0A087WZY1 265 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 A0A1W2PQD3 144 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 CLCA1A8K7I4 914 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 HCRTR2O43614 444 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 NDUFB5O43674 189 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 TNFRSF21O75509 655 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 OXSR1O95747 527 aaPredicted RBP9.51□□□□□ -0.89
CCDC9-203ENST00000596938 C6orf47O95873 294 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 KRT16P08779 473 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 TMIGD3P0DMS9 266 aaPredicted RBP9.51□□□□□ -0.89
CCDC9-203ENST00000596938 EFNA1P20827 205 aaPredicted RBP9.51□□□□□ -0.89
CCDC9-203ENST00000596938 BGNP21810 368 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 UQCRC1P31930 480 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 KIR2DL3P43628 341 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 POU6F2P78424 691 aaPredicted RBP9.51□□□□□ -0.89
CCDC9-203ENST00000596938 OCRLQ01968 901 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 STX5Q13190 355 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 CDC73Q6P1J9 531 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 BHLHB9Q6PI77 547 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 FIGNL1Q6PIW4 674 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 CHMP1BQ7LBR1 199 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 SZRD1Q7Z422 152 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 MISPQ8IVT2 679 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 MEIOBQ8N635 442 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 COX18Q8N8Q8 333 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 OR8J2Q8NGG1 315 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 OR56A1Q8NGH5 318 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 SFXN5Q8TD22 340 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 ACTRT2Q8TDY3 377 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 NUDT8Q8WV74 236 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 PIGQQ9BRB3 760 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 DUSP26Q9BV47 211 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 SFXN3Q9BWM7 321 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 HOXD1Q9GZZ0 328 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 CXorf36Q9H7Y0 433 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 NEUROD4Q9HD90 331 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 GPATCH2Q9NW75 528 aa9.51□□□□□ -0.89
CCDC9-203ENST00000596938 FBXO34Q9NWN3 711 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms