RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 TTC36A6NLP5 189 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 TO15178 435 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 CBR3O75828 277 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 HRGP04196 525 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 G6PDP11413 515 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 KRT20P35900 424 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 MC3RP41968 323 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 CLDN8P56748 225 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 OCRLQ01968 901 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 PLCXD2Q0VAA5 305 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 PTGR1Q14914 329 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 ZNHIT3Q15649 155 aaPredicted RBP15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 NNATQ16517 81 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 ENPP6Q6UWR7 440 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 TMEM107Q6UX40 140 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 BIVMQ86UB2 503 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 WFDC11Q8NEX6 87 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 CEP70Q8NHQ1 597 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 BTBD9Q96Q07 612 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 TM9SF2Q99805 663 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 TUBA1CQ9BQE3 449 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 YIPF4Q9BSR8 244 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 RBM24Q9BX46 236 aaKnown RBP15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 FOLH1BQ9HBA9 442 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 C3orf14Q9HBI5 128 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 GALNT9Q9HCQ5 603 aa15.92■□□□□ 0.14
SHKBP1-203ENST00000594298 NINQ8N4C6 2090 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 A0A1W2PRB8 838 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 UGT2B11O75310 529 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 KITP10721 976 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 FRKP42685 505 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 GFRA1P56159 465 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 C21orf58P58505 322 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 EEF1A1P68104 462 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 MRPS22P82650 360 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 FOXF2Q12947 444 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 HSPB3Q12988 150 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 MLC1Q15049 377 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 LSM12Q3MHD2 195 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 ZNF385BQ569K4 471 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 EEF1A1P5Q5VTE0 462 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 DESI1Q6ICB0 168 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 ZNF551Q7Z340 670 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 SPATA19Q7Z5L4 167 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 OR2L13Q8N349 312 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 WDSUB1Q8N9V3 476 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 SIMC1Q8NDZ2 872 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 PIWIL2Q8TC59 973 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 SMPDL3BQ92485 455 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 WNT2BQ93097 391 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 CIDECQ96AQ7 238 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 COQ8BQ96D53 544 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 VSTM2LQ96N03 204 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 BHLHE41Q9C0J9 482 aaPredicted RBP15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 PIGMQ9H3S5 423 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 INTS9Q9NV88 658 aaKnown RBP15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 GALNT8Q9NY28 637 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 KLRF1Q9NZS2 232 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 ABCA4P78363 2273 aa15.91■□□□□ 0.14
SHKBP1-203ENST00000594298 PRAMEF25A6NGN4 478 aa15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 H0Y3Z8 333 aa15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 UPK1AO00322 258 aa15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 ABCB7O75027 752 aa15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 CD53P19397 219 aa15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 CHMP24386 653 aa15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 ZNF155Q12901 538 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 VPS26BQ4G0F5 336 aa15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 OGFOD2Q6N063 350 aa15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 LARP4Q71RC2 724 aaKnown RBP eCLIP15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 WDR75Q8IWA0 830 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 RIMKLAQ8IXN7 391 aa15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 OR7A2PQ8NGA2 310 aa15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 OR14L1PQ8NHC6 308 aa15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 OR5P2Q8WZ92 322 aa15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 G6PC3Q9BUM1 346 aa15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 DPY30Q9C005 99 aa15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 ANKRA2Q9H9E1 313 aa15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 NEUROD4Q9HD90 331 aa15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 SERHLQ9NQF3 203 aa15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 BEX4Q9NWD9 120 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 CLCF1Q9UBD9 225 aa15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 MARCOQ9UEW3 520 aaPredicted RBP15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 MRTO4Q9UKD2 239 aaKnown RBP15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 OR10H1Q9Y4A9 318 aa15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 AKAP6Q13023 2319 aa15.9■□□□□ 0.14
SHKBP1-203ENST00000594298 KIAA1549Q9HCM3 1950 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 SH3D21A4FU49 640 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 C2orf72A6NCS6 295 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 OR6C70A6NIJ9 312 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 SDHDO14521 159 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 EMC8O43402 210 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 REM1O75628 298 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 SASH3O75995 380 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 LAMP1P11279 417 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 CLNS1AP54105 237 aaKnown RBP15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 PRR5P85299 388 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 GAB1Q13480 694 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 EFR3AQ14156 821 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 CYP27C1Q4G0S4 372 aa15.89■□□□□ 0.13
SHKBP1-203ENST00000594298 IFNEQ86WN2 208 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms