RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 HES7Q9BYE0 225 aa18.08■□□□□ 0.48
LSM4-203ENST00000593829 SAC3D1A6NKF1 404 aa18.07■□□□□ 0.48
LSM4-203ENST00000593829 H3BMQ9 156 aa18.07■□□□□ 0.48
LSM4-203ENST00000593829 UPK1AO00322 258 aa18.07■□□□□ 0.48
LSM4-203ENST00000593829 ANKRD28O15084 1053 aa18.07■□□□□ 0.48
LSM4-203ENST00000593829 UMPSP11172 480 aa18.07■□□□□ 0.48
LSM4-203ENST00000593829 CAPGP40121 348 aa18.07■□□□□ 0.48
LSM4-203ENST00000593829 NRG3P56975 720 aa18.07■□□□□ 0.48
LSM4-203ENST00000593829 MAPKAPK3Q16644 382 aa18.07■□□□□ 0.48
LSM4-203ENST00000593829 PRR30Q53SZ7 412 aaPredicted RBP18.07■□□□□ 0.48
LSM4-203ENST00000593829 USP51Q70EK9 711 aa18.07■□□□□ 0.48
LSM4-203ENST00000593829 DND1Q8IYX4 353 aaKnown RBP18.07■□□□□ 0.48
LSM4-203ENST00000593829 OR2L13Q8N349 312 aa18.07■□□□□ 0.48
LSM4-203ENST00000593829 MAGED4Q96JG8 741 aa18.07■□□□□ 0.48
LSM4-203ENST00000593829 LCORQ96JN0 433 aaPredicted RBP18.07■□□□□ 0.48
LSM4-203ENST00000593829 COX4I2Q96KJ9 171 aa18.07■□□□□ 0.48
LSM4-203ENST00000593829 SGCZQ96LD1 299 aa18.07■□□□□ 0.48
LSM4-203ENST00000593829 COG8Q96MW5 612 aa18.07■□□□□ 0.48
LSM4-203ENST00000593829 GPR45Q9Y5Y3 372 aa18.07■□□□□ 0.48
LSM4-203ENST00000593829 A0A1W2PRB8 838 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 FXYD1O00168 92 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 ATE1O95260 518 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 GNAO1P09471 354 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 FBXO45P0C2W1 286 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 EFNA1P20827 205 aaPredicted RBP18.06■□□□□ 0.48
LSM4-203ENST00000593829 PPICP45877 212 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 RPS6KA2Q15349 733 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 ZNF791Q3KP31 576 aaPredicted RBP18.06■□□□□ 0.48
LSM4-203ENST00000593829 LYPD8Q6UX82 237 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 RTL4Q6ZR62 310 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 MDGA2Q7Z553 956 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 OR9I1Q8NGQ6 314 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 TBC1D15Q8TC07 691 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 SPACA9Q96E40 222 aaPredicted RBP18.06■□□□□ 0.48
LSM4-203ENST00000593829 NXF5Q9H1B4 397 aaKnown RBP18.06■□□□□ 0.48
LSM4-203ENST00000593829 ZNF462Q96JM2 2506 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 NME2P1O60361 137 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 JUNBP17275 347 aaPredicted RBP18.06■□□□□ 0.48
LSM4-203ENST00000593829 DRD5P21918 477 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 NME2P22392 152 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 SRSF11Q05519 484 aaKnown RBP18.06■□□□□ 0.48
LSM4-203ENST00000593829 MOGQ16653 247 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 GALNTL5Q7Z4T8 443 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 MIER2Q8N344 545 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 GIPC3Q8TF64 312 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 OR5P2Q8WZ92 322 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 TESCQ96BS2 214 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 VSTM2LQ96N03 204 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 FOLH1BQ9HBA9 442 aa18.06■□□□□ 0.48
LSM4-203ENST00000593829 GPR55Q9Y2T6 319 aaPredicted RBP18.06■□□□□ 0.48
LSM4-203ENST00000593829 H0YAE9 185 aa18.05■□□□□ 0.48
LSM4-203ENST00000593829 CLOCKO15516 846 aa18.05■□□□□ 0.48
LSM4-203ENST00000593829 RAB39AQ14964 217 aa18.05■□□□□ 0.48
LSM4-203ENST00000593829 NNATQ16517 81 aa18.05■□□□□ 0.48
LSM4-203ENST00000593829 DPY19L1Q2PZI1 675 aa18.05■□□□□ 0.48
LSM4-203ENST00000593829 FAM180AQ6UWF9 173 aa18.05■□□□□ 0.48
LSM4-203ENST00000593829 DHRSXQ8N5I4 330 aa18.05■□□□□ 0.48
LSM4-203ENST00000593829 PSD4Q8NDX1 1056 aa18.05■□□□□ 0.48
LSM4-203ENST00000593829 OR8J2Q8NGG1 315 aa18.05■□□□□ 0.48
LSM4-203ENST00000593829 CLMPQ9H6B4 373 aa18.05■□□□□ 0.48
LSM4-203ENST00000593829 ASF1BQ9NVP2 202 aa18.05■□□□□ 0.48
LSM4-203ENST00000593829 CMTM6Q9NX76 183 aa18.05■□□□□ 0.48
LSM4-203ENST00000593829 KLF13Q9Y2Y9 288 aaPredicted RBP18.05■□□□□ 0.48
LSM4-203ENST00000593829 NPFFR2Q9Y5X5 522 aa18.05■□□□□ 0.48
LSM4-203ENST00000593829 FRG2CA6NGY1 282 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 NME6O75414 186 aaPredicted RBP18.04■□□□□ 0.48
LSM4-203ENST00000593829 ERN1O75460 977 aaKnown RBP18.04■□□□□ 0.48
LSM4-203ENST00000593829 SLC6A2P23975 617 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 KIR3DL1P43629 444 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 TMED10P49755 219 aaKnown RBP18.04■□□□□ 0.48
LSM4-203ENST00000593829 UFM1P61960 85 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 PMS2P3Q13401 168 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 PDCD4Q53EL6 469 aaKnown RBP18.04■□□□□ 0.48
LSM4-203ENST00000593829 OR4F3Q6IEY1 312 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 TMEM64Q6YI46 380 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 FAM98AQ8NCA5 519 aaKnown RBP18.04■□□□□ 0.48
LSM4-203ENST00000593829 GRHL3Q8TE85 626 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 TAAR6Q96RI8 345 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 SLC39A3Q9BRY0 314 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 C3orf14Q9HBI5 128 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 SLC52A3Q9NQ40 469 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 SDR39U1Q9NRG7 319 aaPredicted RBP18.04■□□□□ 0.48
LSM4-203ENST00000593829 SMPD3Q9NY59 655 aaPredicted RBP18.04■□□□□ 0.48
LSM4-203ENST00000593829 NTMQ9P121 344 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 AURKCQ9UQB9 309 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 NTNG1Q9Y2I2 539 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 RNF103-CHMP3A0A140T963 221 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 TCRBV5S2A0A599 114 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 KLRC4-KLRK1H3BQV0 150 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 ANGPT2O15123 496 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 ARPC2O15144 300 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 CAPN3P20807 821 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 TMBIM6P55061 237 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 ZNF155Q12901 538 aaPredicted RBP18.04■□□□□ 0.48
LSM4-203ENST00000593829 CBX3Q13185 183 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 SPPL2CQ8IUH8 684 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 ZBTB18Q99592 522 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 TMEM45AQ9NWC5 275 aa18.04■□□□□ 0.48
LSM4-203ENST00000593829 SPENQ96T58 3664 aaKnown RBP18.03■□□□□ 0.48
LSM4-203ENST00000593829 NR5A2O00482 541 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms