RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 MMGT1Q8N4V1 131 aa14.67□□□□□ -0.06
LIG1-205ENST00000593425 GFM2Q969S9 779 aaKnown RBP14.67□□□□□ -0.06
LIG1-205ENST00000593425 ELP4Q96EB1 424 aa14.67□□□□□ -0.06
LIG1-205ENST00000593425 AMDHD1Q96NU7 426 aa14.67□□□□□ -0.06
LIG1-205ENST00000593425 NPAS1Q99742 590 aa14.67□□□□□ -0.06
LIG1-205ENST00000593425 MYNNQ9NPC7 610 aa14.67□□□□□ -0.06
LIG1-205ENST00000593425 GRID1Q9ULK0 1009 aa14.67□□□□□ -0.06
LIG1-205ENST00000593425 VDAC3Q9Y277 283 aa14.67□□□□□ -0.06
LIG1-205ENST00000593425 GOLGA8RI6L899 631 aa14.66□□□□□ -0.06
LIG1-205ENST00000593425 EIF1AYO14602 144 aaKnown RBP14.66□□□□□ -0.06
LIG1-205ENST00000593425 KLF4O43474 513 aa14.66□□□□□ -0.06
LIG1-205ENST00000593425 UTS2O95399 124 aa14.66□□□□□ -0.06
LIG1-205ENST00000593425 CNOT4O95628 575 aaKnown RBP14.66□□□□□ -0.06
LIG1-205ENST00000593425 PLAUP00749 431 aa14.66□□□□□ -0.06
LIG1-205ENST00000593425 FCGR2AP12318 317 aa14.66□□□□□ -0.06
LIG1-205ENST00000593425 NTSP30990 170 aa14.66□□□□□ -0.06
LIG1-205ENST00000593425 EIF1AXP47813 144 aaKnown RBP14.66□□□□□ -0.06
LIG1-205ENST00000593425 CLK3P49761 638 aaKnown RBP14.66□□□□□ -0.06
LIG1-205ENST00000593425 PRR5P85299 388 aa14.66□□□□□ -0.06
LIG1-205ENST00000593425 OCRLQ01968 901 aa14.66□□□□□ -0.06
LIG1-205ENST00000593425 ZNHIT3Q15649 155 aaPredicted RBP14.66□□□□□ -0.06
LIG1-205ENST00000593425 GRAMD1BQ3KR37 738 aa14.66□□□□□ -0.06
LIG1-205ENST00000593425 OR6K3Q8NGY3 331 aa14.66□□□□□ -0.06
LIG1-205ENST00000593425 PIK3R3Q92569 461 aa14.66□□□□□ -0.06
LIG1-205ENST00000593425 TBL1XR1Q9BZK7 514 aa14.66□□□□□ -0.06
LIG1-205ENST00000593425 MID1IP1Q9NPA3 183 aa14.66□□□□□ -0.06
LIG1-205ENST00000593425 TAS2R7Q9NYW3 318 aa14.66□□□□□ -0.06
LIG1-205ENST00000593425 MRTO4Q9UKD2 239 aaKnown RBP14.66□□□□□ -0.06
LIG1-205ENST00000593425 CCDC151A5D8V7 595 aa14.65□□□□□ -0.06
LIG1-205ENST00000593425 SS18L1O75177 396 aaPredicted RBP14.65□□□□□ -0.06
LIG1-205ENST00000593425 URI1O94763 535 aaPredicted RBP14.65□□□□□ -0.06
LIG1-205ENST00000593425 GABRA3P34903 492 aa14.65□□□□□ -0.06
LIG1-205ENST00000593425 PSMD4P55036 377 aaKnown RBP14.65□□□□□ -0.06
LIG1-205ENST00000593425 C17orf67Q0P5P2 114 aa14.65□□□□□ -0.06
LIG1-205ENST00000593425 IMPG1Q17R60 797 aa14.65□□□□□ -0.06
LIG1-205ENST00000593425 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.65□□□□□ -0.06
LIG1-205ENST00000593425 CTU2Q2VPK5 515 aaKnown RBP14.65□□□□□ -0.06
LIG1-205ENST00000593425 BEX5Q5H9J7 111 aa14.65□□□□□ -0.06
LIG1-205ENST00000593425 STAC2Q6ZMT1 411 aa14.65□□□□□ -0.06
LIG1-205ENST00000593425 ZNF704Q6ZNC4 412 aaPredicted RBP14.65□□□□□ -0.06
LIG1-205ENST00000593425 PLEKHM3Q6ZWE6 761 aa14.65□□□□□ -0.06
LIG1-205ENST00000593425 GALNT10Q86SR1 603 aa14.65□□□□□ -0.06
LIG1-205ENST00000593425 LCA5Q86VQ0 697 aa14.65□□□□□ -0.06
LIG1-205ENST00000593425 OR10D3Q8NH80 312 aa14.65□□□□□ -0.06
LIG1-205ENST00000593425 SLC9A6Q92581 669 aa14.65□□□□□ -0.06
LIG1-205ENST00000593425 ADGRG7Q96K78 797 aa14.65□□□□□ -0.06
LIG1-205ENST00000593425 PRRG4Q9BZD6 226 aa14.65□□□□□ -0.06
LIG1-205ENST00000593425 EQTNQ9NQ60 294 aa14.65□□□□□ -0.06
LIG1-205ENST00000593425 PLSCR4Q9NRQ2 329 aa14.65□□□□□ -0.06
LIG1-205ENST00000593425 EMC9Q9Y3B6 208 aa14.65□□□□□ -0.06
LIG1-205ENST00000593425 UQCRHLA0A096LP55 91 aa14.64□□□□□ -0.07
LIG1-205ENST00000593425 OPN1LWP04000 364 aa14.64□□□□□ -0.07
LIG1-205ENST00000593425 ABHD2P08910 425 aa14.64□□□□□ -0.07
LIG1-205ENST00000593425 PAX1P15863 534 aa14.64□□□□□ -0.07
LIG1-205ENST00000593425 ZNF17P17021 662 aa14.64□□□□□ -0.07
LIG1-205ENST00000593425 HSPB3Q12988 150 aa14.64□□□□□ -0.07
LIG1-205ENST00000593425 WHAMMP3Q1A5X7 153 aa14.64□□□□□ -0.07
LIG1-205ENST00000593425 ZNF551Q7Z340 670 aaPredicted RBP14.64□□□□□ -0.07
LIG1-205ENST00000593425 EXOC3L1Q86VI1 746 aa14.64□□□□□ -0.07
LIG1-205ENST00000593425 CCNYL1Q8N7R7 359 aa14.64□□□□□ -0.07
LIG1-205ENST00000593425 GMPPAQ96IJ6 420 aaPredicted RBP14.64□□□□□ -0.07
LIG1-205ENST00000593425 EGLN2Q96KS0 407 aa14.64□□□□□ -0.07
LIG1-205ENST00000593425 KLHDC3Q9BQ90 382 aa14.64□□□□□ -0.07
LIG1-205ENST00000593425 TNFRSF12AQ9NP84 129 aa14.64□□□□□ -0.07
LIG1-205ENST00000593425 ADAM21Q9UKJ8 722 aa14.64□□□□□ -0.07
LIG1-205ENST00000593425 EMCNQ9ULC0 261 aa14.64□□□□□ -0.07
LIG1-205ENST00000593425 CXCL13O43927 109 aa14.63□□□□□ -0.07
LIG1-205ENST00000593425 RSL1D1O76021 490 aaKnown RBP14.63□□□□□ -0.07
LIG1-205ENST00000593425 NKX2-2O95096 273 aa14.63□□□□□ -0.07
LIG1-205ENST00000593425 KCNH1O95259 989 aa14.63□□□□□ -0.07
LIG1-205ENST00000593425 OXSR1O95747 527 aaPredicted RBP14.63□□□□□ -0.07
LIG1-205ENST00000593425 PLGP00747 810 aaPredicted RBP14.63□□□□□ -0.07
LIG1-205ENST00000593425 NID1P14543 1247 aa14.63□□□□□ -0.07
LIG1-205ENST00000593425 PPP3CBP16298 524 aa14.63□□□□□ -0.07
LIG1-205ENST00000593425 PSMA4P25789 261 aaKnown RBP14.63□□□□□ -0.07
LIG1-205ENST00000593425 MAP3K8P41279 467 aa14.63□□□□□ -0.07
LIG1-205ENST00000593425 PPP2R2BQ00005 443 aa14.63□□□□□ -0.07
LIG1-205ENST00000593425 CAPRIN1Q14444 709 aaKnown RBP14.63□□□□□ -0.07
LIG1-205ENST00000593425 ANKRD26P1Q6NSI1 321 aa14.63□□□□□ -0.07
LIG1-205ENST00000593425 NOXRED1Q6NXP6 359 aa14.63□□□□□ -0.07
LIG1-205ENST00000593425 SH2D5Q6ZV89 423 aa14.63□□□□□ -0.07
LIG1-205ENST00000593425 TRIM46Q7Z4K8 759 aa14.63□□□□□ -0.07
LIG1-205ENST00000593425 ZAR1Q86SH2 424 aa14.63□□□□□ -0.07
LIG1-205ENST00000593425 WFDC8Q8IUA0 241 aa14.63□□□□□ -0.07
LIG1-205ENST00000593425 GATSQ8NAP1 163 aa14.63□□□□□ -0.07
LIG1-205ENST00000593425 OR4C3Q8NH37 302 aa14.63□□□□□ -0.07
LIG1-205ENST00000593425 GPR151Q8TDV0 419 aa14.63□□□□□ -0.07
LIG1-205ENST00000593425 MZB1Q8WU39 189 aa14.63□□□□□ -0.07
LIG1-205ENST00000593425 TMEM171Q8WVE6 324 aa14.63□□□□□ -0.07
LIG1-205ENST00000593425 HOXB13Q92826 284 aaPredicted RBP14.63□□□□□ -0.07
LIG1-205ENST00000593425 PLPPR2Q96GM1 343 aa14.63□□□□□ -0.07
LIG1-205ENST00000593425 C16orf45Q96MC5 204 aaPredicted RBP14.63□□□□□ -0.07
LIG1-205ENST00000593425 C3orf14Q9HBI5 128 aa14.63□□□□□ -0.07
LIG1-205ENST00000593425 ZNF701Q9NV72 531 aaPredicted RBP14.63□□□□□ -0.07
LIG1-205ENST00000593425 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.62□□□□□ -0.07
LIG1-205ENST00000593425 ALG1L2C9J202 215 aa14.62□□□□□ -0.07
LIG1-205ENST00000593425 G3V2L1 256 aa14.62□□□□□ -0.07
LIG1-205ENST00000593425 TNFSF11O14788 317 aa14.62□□□□□ -0.07
LIG1-205ENST00000593425 IFI6P09912 130 aa14.62□□□□□ -0.07
LIG1-205ENST00000593425 PYGBP11216 843 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms