RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, human

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-222	ENST00000590619	ASPHD2	Q6ICH7	369 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	LEG1	Q6P5S2	330 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	LARP4	Q71RC2	724 aa	Known RBP eCLIP	5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	SLC46A3	Q7Z3Q1	461 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	C1QL2	Q7Z5L3	287 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	CARM1	Q86X55	608 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	LMNTD2	Q8IXW0	634 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	BPIFB2	Q8N4F0	458 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	SIGLECL1	Q8N7X8	197 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	OR4N2	Q8NGD1	307 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	OR52R1	Q8NGF1	315 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	CLDND2	Q8NHS1	167 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	RNF128	Q8TEB7	428 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	C1orf54	Q8WWF1	131 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	DVL3	Q92997	716 aa	Predicted RBP	5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	ZNF669	Q96BR6	464 aa	Predicted RBP	5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	ZNF775	Q96BV0	537 aa	Predicted RBP	5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	CMTM7	Q96FZ5	175 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	EGFL8	Q99944	293 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	CITED1	Q99966	193 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	RSPO3	Q9BXY4	272 aa	Predicted RBP	5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	TMPRSS13	Q9BYE2	586 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	RACGAP1	Q9H0H5	632 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	RAB1B	Q9H0U4	201 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	PTGES2	Q9H7Z7	377 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	FKRP	Q9H9S5	495 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	SDHAF3	Q9NRP4	125 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	IARS2	Q9NSE4	1012 aa	Known RBP	5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	C20orf96	Q9NUD7	363 aa	Predicted RBP	5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	MAT2B	Q9NZL9	334 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	FLRT3	Q9NZU0	649 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	KLHL13	Q9P2N7	655 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	STOML1	Q9UBI4	398 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	MOK	Q9UQ07	419 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	EXPH5	Q8NEV8	1989 aa		5.62	□□□□□ -1.51
DNMT1-222	ENST00000590619	RYR2	Q92736	4967 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	SDR42E2	A6NKP2	422 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619		G3V4G9	280 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619		M0QZ24	198 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	GMFG	O60234	142 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	PNP	P00491	289 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	PABPC4L	P0CB38	370 aa	Known RBP	5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	CTAGE8	P0CG41	777 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	GAA	P10253	952 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	NR2F6	P10588	404 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	PCNA	P12004	261 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	POR	P16435	677 aa	Predicted RBP	5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	EPOR	P19235	508 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	COX5A	P20674	150 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	OMG	P23515	440 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	FPR2	P25090	351 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	PSMA4	P25789	261 aa	Known RBP	5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	EVI2B	P34910	448 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	BSG	P35613	385 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	GGT5	P36269	586 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	IDH3G	P51553	393 aa	Predicted RBP	5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	CORO7	P57737	925 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	KRTAP10-3	P60369	221 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	LMO4	P61968	165 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	SNRPD2	P62316	118 aa	Known RBP	5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	BASP1	P80723	227 aa	Known RBP	5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	POU4F1	Q01851	419 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	CHIT1	Q13231	466 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	PDAP1	Q13442	181 aa	Known RBP	5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	LAPTM5	Q13571	262 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	E2F2	Q14209	437 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	RNPS1	Q15287	305 aa	Known RBP	5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	ZNHIT3	Q15649	155 aa	Predicted RBP	5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	ZNF628	Q5EBL2	1059 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	ARL13A	Q5H913	290 aa	Predicted RBP	5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	CCBE1	Q6UXH8	406 aa	Predicted RBP	5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	ESPNL	Q6ZVH7	1005 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	MARCH3	Q86UD3	253 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	CTAGE4	Q8IX94	777 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	LAS2	Q8IYD9	372 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	TEX29	Q8N6K0	151 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	KIR3DL3	Q8N743	410 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	CCDC89	Q8N998	374 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	WDR31	Q8NA23	367 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	C2CD4A	Q8NCU7	369 aa	Predicted RBP	5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	TRIM58	Q8NG06	486 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	OR7G3	Q8NG95	312 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	NANP	Q8TBE9	248 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	CALML6	Q8TD86	181 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	UBASH3B	Q8TF42	649 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	WDR60	Q8WVS4	1066 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	NEU4	Q8WWR8	484 aa	Predicted RBP	5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	TMIGD2	Q96BF3	282 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	EFHD2	Q96C19	240 aa	Predicted RBP	5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	MUS81	Q96NY9	551 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	EFCAB11	Q9BUY7	163 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	SRXN1	Q9BYN0	137 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	NAT10	Q9H0A0	1025 aa	Known RBP	5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	PLK3	Q9H4B4	646 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	DDX31	Q9H8H2	851 aa	Known RBP	5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	ANKZF1	Q9H8Y5	726 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	ANKRA2	Q9H9E1	313 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	WDR41	Q9HAD4	459 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	GP6	Q9HCN6	339 aa		5.61	□□□□□ -1.51
DNMT1-222	ENST00000590619	SAYSD1	Q9NPB0	183 aa		5.61	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms