RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 TRPC1P48995 793 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 HCFC1P51610 2035 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 DIO3P55073 304 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 CLDN8P56748 225 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 MRPS22P82650 360 aaKnown RBP10.2□□□□□ -0.78
SMAD4-211ENST00000590499 OCRLQ01968 901 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 ZNF630Q2M218 657 aaPredicted RBP10.2□□□□□ -0.78
SMAD4-211ENST00000590499 NHSL2Q5HYW2 709 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 CPTPQ5TA50 214 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 AGBL2Q5U5Z8 902 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 MFSD12Q6NUT3 480 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 NATD1Q8N6N6 113 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 CDRT4Q8N9R6 151 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 FAM83FQ8NEG4 500 aaPredicted RBP10.2□□□□□ -0.78
SMAD4-211ENST00000590499 NUP43Q8NFH3 380 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 OR1J4Q8NGS1 313 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 CEP70Q8NHQ1 597 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 RAB3IL1Q8TBN0 382 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 MGARPQ8TDB4 240 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 FAM120BQ96EK7 910 aaKnown RBP10.2□□□□□ -0.78
SMAD4-211ENST00000590499 PPP1R36Q96LQ0 422 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 DOCK7Q96N67 2140 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 CSMD1Q96PZ7 3565 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 NUF2Q9BZD4 464 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 RTN4RQ9BZR6 473 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 BHLHE41Q9C0J9 482 aaPredicted RBP10.2□□□□□ -0.78
SMAD4-211ENST00000590499 OR2B2Q9GZK3 357 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 RASSF4Q9H2L5 321 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 KIAA1549Q9HCM3 1950 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 Q9N2J8 555 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 EQTNQ9NQ60 294 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 SERHLQ9NQF3 203 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 THAP1Q9NVV9 213 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 FLRT3Q9NZU0 649 aa10.2□□□□□ -0.78
SMAD4-211ENST00000590499 A0A1W2PRB8 838 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 GXYLT2A0PJZ3 443 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 C17orf51A8MQB3 221 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 PRSS44E7EML9 344 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 SDHDO14521 159 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 EMC8O43402 210 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 TRAPPC6AO75865 159 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 ALX3O95076 343 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 CLDN14O95500 239 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 H2AFXP16104 143 aaPredicted RBP10.19□□□□□ -0.78
SMAD4-211ENST00000590499 HTR1EP28566 365 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 GABRA3P34903 492 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 KRT20P35900 424 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 WNT3P56703 355 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 NUP107P57740 925 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 ZNHIT3Q15649 155 aaPredicted RBP10.19□□□□□ -0.78
SMAD4-211ENST00000590499 DECR1Q16698 335 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 EIPR1Q53HC9 387 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 WIPI1Q5MNZ9 446 aaPredicted RBP10.19□□□□□ -0.78
SMAD4-211ENST00000590499 DCST1Q5T197 706 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 WLSQ5T9L3 541 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 VASNQ6EMK4 673 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 TMEM211Q6ICI0 200 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 OGFOD2Q6N063 350 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 ZCCHC12Q6PEW1 402 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 PLCZ1Q86YW0 608 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 ULK2Q8IYT8 1036 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 SLC16A11Q8NCK7 471 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 FAM110BQ8TC76 370 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 OR5P2Q8WZ92 322 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 PIK3R3Q92569 461 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 TIMP4Q99727 224 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 TTYH2Q9BSA4 534 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 DUSP26Q9BV47 211 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 PRDM14Q9GZV8 571 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 EXO5Q9H790 373 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 CXorf36Q9H7Y0 433 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 C3orf14Q9HBI5 128 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 ATAD3AQ9NVI7 634 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 FAM120CQ9NX05 1096 aaKnown RBP10.19□□□□□ -0.78
SMAD4-211ENST00000590499 NKIRAS1Q9NYS0 192 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 FBXL2Q9UKC9 423 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 ACAD8Q9UKU7 415 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 ABCG2Q9UNQ0 655 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 MAPRE3Q9UPY8 281 aa10.19□□□□□ -0.78
SMAD4-211ENST00000590499 C15orf38-AP3S2A0A0A6YYH1 394 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 F8W735 103 aaPredicted RBP10.18□□□□□ -0.78
SMAD4-211ENST00000590499 LINC01387J3KSC0 135 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 KLF11O14901 512 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 HDAC3O15379 428 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 SCN2BO60939 215 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 CBR3O75828 277 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 C6orf47O95873 294 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 RPLP1P05386 114 aaKnown RBP10.18□□□□□ -0.78
SMAD4-211ENST00000590499 HOXD4P09016 255 aaPredicted RBP10.18□□□□□ -0.78
SMAD4-211ENST00000590499 ALDOCP09972 364 aaKnown RBP10.18□□□□□ -0.78
SMAD4-211ENST00000590499 GLI4P10075 376 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 GABRA1P14867 456 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 BMP7P18075 431 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 LBPP18428 481 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 SRD5A2P31213 254 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 PRKAG1P54619 331 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 PRR5P85299 388 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 DUSP5Q16690 384 aa10.18□□□□□ -0.78
SMAD4-211ENST00000590499 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.18□□□□□ -0.78
SMAD4-211ENST00000590499 VPS26BQ4G0F5 336 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms