RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 LIPKQ5VXJ0 399 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 PAQR6Q6TCH4 344 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 ZNF620Q6ZNG0 422 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 CCDC190Q86UF4 302 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 FAM174AQ8TBP5 190 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 NEURL2Q9BR09 285 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 SEMA6CQ9H3T2 930 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 H2AFY2Q9P0M6 372 aaPredicted RBP17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 NTNG1Q9Y2I2 539 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 OR5K3A6NET4 321 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 SURF4O15260 269 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 THY1P04216 161 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 SOX18P35713 384 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 RPS19P39019 145 aaKnown RBP17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 GPR4P46093 362 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 CDH11P55287 796 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 POU6F2P78424 691 aaPredicted RBP17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 CLEC12AQ5QGZ9 265 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 TMEFF1Q8IYR6 380 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 CACTIN-AS1Q8N1I8 211 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 GALNT6Q8NCL4 622 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 SIMC1Q8NDZ2 872 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 OR2T33Q8NG76 320 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 GPR151Q8TDV0 419 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 TMEM255BQ8WV15 326 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 KCNS3Q9BQ31 491 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 TCEAL2Q9H3H9 227 aaPredicted RBP17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 SMURF1Q9HCE7 757 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 MAT2BQ9NZL9 334 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 GPR52Q9Y2T5 361 aa17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 SPIN1Q9Y657 262 aaPredicted RBP17.84■□□□□ 0.45
PRKCSH-209ENST00000589838 COQ9O75208 318 aa17.83■□□□□ 0.44
PRKCSH-209ENST00000589838 THEGLP0DJG4 465 aa17.83■□□□□ 0.44
PRKCSH-209ENST00000589838 DEFA1P59665 94 aa17.83■□□□□ 0.44
PRKCSH-209ENST00000589838 DEFA3P59666 94 aa17.83■□□□□ 0.44
PRKCSH-209ENST00000589838 SKP1P63208 163 aa17.83■□□□□ 0.44
PRKCSH-209ENST00000589838 TPBGQ13641 420 aa17.83■□□□□ 0.44
PRKCSH-209ENST00000589838 CCNJQ5T5M9 372 aa17.83■□□□□ 0.44
PRKCSH-209ENST00000589838 AADACL4Q5VUY2 407 aa17.83■□□□□ 0.44
PRKCSH-209ENST00000589838 PRSS41Q7RTY9 318 aa17.83■□□□□ 0.44
PRKCSH-209ENST00000589838 GALNT12Q8IXK2 581 aa17.83■□□□□ 0.44
PRKCSH-209ENST00000589838 POGLUT1Q8NBL1 392 aa17.83■□□□□ 0.44
PRKCSH-209ENST00000589838 TOE1Q96GM8 510 aaKnown RBP17.83■□□□□ 0.44
PRKCSH-209ENST00000589838 SLC30A2Q9BRI3 323 aa17.83■□□□□ 0.44
PRKCSH-209ENST00000589838 TMEM74BQ9NUR3 256 aa17.83■□□□□ 0.44
PRKCSH-209ENST00000589838 C14orf105Q9NVL8 296 aa17.83■□□□□ 0.44
PRKCSH-209ENST00000589838 PCDHGB6Q9Y5F9 930 aa17.83■□□□□ 0.44
PRKCSH-209ENST00000589838 SCN2AQ99250 2005 aa17.83■□□□□ 0.44
PRKCSH-209ENST00000589838 UNC119BA6NIH7 251 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 BOLA2-SMG1P6H3BVE0 249 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 IL1AP01583 271 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 SLC35E2P0CK97 266 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 HHEXQ03014 270 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 DSG2Q14126 1118 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 FZD2Q14332 565 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 PLK5Q496M5 336 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 MRPL2Q5T653 305 aaKnown RBP17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 SLC30A6Q6NXT4 461 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 CDK20Q8IZL9 346 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 POC5Q8NA72 575 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 OR5T3Q8NGG3 340 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 OR4Q3Q8NH05 313 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 UFD1Q92890 307 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 NELL2Q99435 816 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 CCDC32Q9BV29 185 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 CYP8B1Q9UNU6 501 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 CARD8Q9Y2G2 431 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 C2CD4DB7Z1M9 353 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 SLC30A4O14863 429 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 PIP5K1CO60331 668 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 PTTG1O95997 202 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 MAP3K8P41279 467 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 MGAT2Q10469 447 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 OR1Q1Q15612 314 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 NXNL2Q5VZ03 156 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 STEAP3Q658P3 488 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 RPL13AP3Q6NVV1 102 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 C11orf74Q86VG3 221 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 TMEM52Q8NDY8 209 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 BRIX1Q8TDN6 353 aaKnown RBP17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 ZDHHC1Q8WTX9 485 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 CTHRC1Q96CG8 243 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 GPR27Q9NS67 375 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 TXNL4BQ9NX01 149 aaKnown RBP17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 QPCTLQ9NXS2 382 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 POMT2Q9UKY4 750 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 TMEM5Q9Y2B1 443 aa17.82■□□□□ 0.44
PRKCSH-209ENST00000589838 CDHR4A6H8M9 788 aa17.81■□□□□ 0.44
PRKCSH-209ENST00000589838 GUSBP08236 651 aa17.81■□□□□ 0.44
PRKCSH-209ENST00000589838 HTR1FP30939 366 aa17.81■□□□□ 0.44
PRKCSH-209ENST00000589838 GABRA3P34903 492 aa17.81■□□□□ 0.44
PRKCSH-209ENST00000589838 MAPK14Q16539 360 aa17.81■□□□□ 0.44
PRKCSH-209ENST00000589838 ZNF542PQ5EBM4 170 aa17.81■□□□□ 0.44
PRKCSH-209ENST00000589838 AVL9Q8NBF6 648 aa17.81■□□□□ 0.44
PRKCSH-209ENST00000589838 OR52L1Q8NGH7 329 aa17.81■□□□□ 0.44
PRKCSH-209ENST00000589838 ANKRD9Q96BM1 317 aaPredicted RBP17.81■□□□□ 0.44
PRKCSH-209ENST00000589838 KLHDC7BQ96G42 594 aa17.81■□□□□ 0.44
PRKCSH-209ENST00000589838 SNTG1Q9NSN8 517 aa17.81■□□□□ 0.44
PRKCSH-209ENST00000589838 TRAPPC4Q9Y296 219 aa17.81■□□□□ 0.44
PRKCSH-209ENST00000589838 EXOGQ9Y2C4 368 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms