RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 CHERPQ8IWX8 916 aaKnown RBP9.48□□□□□ -0.89
SDF2-208ENST00000589788 CDRT4Q8N9R6 151 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 NUP43Q8NFH3 380 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 OR4N2Q8NGD1 307 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 OR1J4Q8NGS1 313 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 FAM57AQ8TBR7 257 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 BCAS4Q8TDM0 211 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 EFHD2Q96C19 240 aaPredicted RBP9.48□□□□□ -0.89
SDF2-208ENST00000589788 COQ8BQ96D53 544 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 TMEM41AQ96HV5 264 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 MS4A4EQ96PG1 132 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 PSMG3-AS1Q96PY0 264 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 NODALQ96S42 347 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 ELAC2Q9BQ52 826 aaKnown RBP9.48□□□□□ -0.89
SDF2-208ENST00000589788 LMF2Q9BU23 707 aaKnown RBP9.48□□□□□ -0.89
SDF2-208ENST00000589788 DUSP26Q9BV47 211 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 PIF1Q9H611 641 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 GALNT9Q9HCQ5 603 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 QPCTLQ9NXS2 382 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 CBLCQ9ULV8 474 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 SNX8Q9Y5X2 465 aa9.48□□□□□ -0.89
SDF2-208ENST00000589788 SPTAN1Q13813 2472 aaKnown RBP9.47□□□□□ -0.89
SDF2-208ENST00000589788 NCKAP5O14513 1909 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 HECTD1Q9ULT8 2610 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 OR14I1A6ND48 311 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 NPIPA2E9PIF3 369 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 NPIPA3F8WFD2 350 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 SDHDO14521 159 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 NDUFAB1O14561 156 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 BCKDKO14874 412 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 HCN1O60741 890 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 ICOSLGO75144 302 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 KCNH1O95259 989 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 IGHG3P01860 377 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 RFPL3SP0C7P2 107 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 CLNS1AP54105 237 aaKnown RBP9.47□□□□□ -0.89
SDF2-208ENST00000589788 PSMD4P55036 377 aaKnown RBP9.47□□□□□ -0.89
SDF2-208ENST00000589788 AQP5P55064 265 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 C21orf58P58505 322 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 GAB1Q13480 694 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 EXOSC6Q5RKV6 272 aaKnown RBP9.47□□□□□ -0.89
SDF2-208ENST00000589788 TIGD3Q6B0B8 471 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 NXNQ6DKJ4 435 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 OGFOD2Q6N063 350 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 EPGNQ6UW88 154 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 C3P1Q6ZMU1 363 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 TRILQ7L0X0 811 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.47□□□□□ -0.89
SDF2-208ENST00000589788 DOLPP1Q86YN1 238 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 RIMKLAQ8IXN7 391 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 RFWD2Q8NHY2 731 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 GPR151Q8TDV0 419 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 C10orf82Q8WW14 230 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 OR5P2Q8WZ92 322 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 SLC9A6Q92581 669 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 JADE3Q92613 823 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 SARAFQ96BY9 339 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 THOC1Q96FV9 657 aaKnown RBP9.47□□□□□ -0.89
SDF2-208ENST00000589788 CCDC120Q96HB5 630 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 MAELQ96JY0 434 aaKnown RBP9.47□□□□□ -0.89
SDF2-208ENST00000589788 GNRHR2Q96P88 292 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 RABEP2Q9H5N1 569 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 ZCCHC3Q9NUD5 404 aaKnown RBP9.47□□□□□ -0.89
SDF2-208ENST00000589788 NTMQ9P121 344 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 ACAD8Q9UKU7 415 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 HIF3AQ9Y2N7 669 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 C15orf41Q9Y2V0 281 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 MEMO1Q9Y316 297 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 LIPGQ9Y5X9 500 aa9.47□□□□□ -0.89
SDF2-208ENST00000589788 ICE1Q9Y2F5 2266 aa9.46□□□□□ -0.89
SDF2-208ENST00000589788 FREM3P0C091 2139 aa9.46□□□□□ -0.89
SDF2-208ENST00000589788 USP9YO00507 2555 aaPredicted RBP9.46□□□□□ -0.89
SDF2-208ENST00000589788 A0A0G2JND7 137 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 GOLGA8QA0A0J9YX86 632 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 A0A1B0GVC2 190 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 GOLGA8OA6NCC3 632 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 E9PLN8 166 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 GOLGA8NF8WBI6 632 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 AQP7O14520 342 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 SMAD7O15105 426 aaKnown RBP9.46□□□□□ -0.9
SDF2-208ENST00000589788 IL33O95760 270 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 C6orf47O95873 294 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 ALOX5P09917 674 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 IMPDH2P12268 514 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 GP1BBP13224 206 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 CYP4B1P13584 511 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 SOAT1P35610 550 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 KIR3DL1P43629 444 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 TRPC1P48995 793 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 CCT3P49368 545 aaKnown RBP9.46□□□□□ -0.9
SDF2-208ENST00000589788 PRIM2P49643 509 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 CLK3P49761 638 aaKnown RBP9.46□□□□□ -0.9
SDF2-208ENST00000589788 SMSP52788 366 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 ARFIP2P53365 341 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 GABPB1Q06547 395 aaPredicted RBP9.46□□□□□ -0.9
SDF2-208ENST00000589788 TP53BP2Q13625 1128 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 WLSQ5T9L3 541 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 FNDC7Q5VTL7 733 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 MFSD12Q6NUT3 480 aa9.46□□□□□ -0.9
SDF2-208ENST00000589788 ZCCHC12Q6PEW1 402 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms