RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 SNTA1Q13424 505 aa17.36■□□□□ 0.37
CLPTM1-209ENST00000588855 GPR68Q15743 365 aa17.36■□□□□ 0.37
CLPTM1-209ENST00000588855 GCNT6Q5T4J0 391 aa17.36■□□□□ 0.37
CLPTM1-209ENST00000588855 TYW3Q6IPR3 259 aaKnown RBP17.36■□□□□ 0.37
CLPTM1-209ENST00000588855 SLC30A6Q6NXT4 461 aa17.36■□□□□ 0.37
CLPTM1-209ENST00000588855 APOOLQ6UXV4 268 aa17.36■□□□□ 0.37
CLPTM1-209ENST00000588855 ZFP62Q8NB50 900 aaPredicted RBP17.36■□□□□ 0.37
CLPTM1-209ENST00000588855 OR8J3Q8NGG0 315 aa17.36■□□□□ 0.37
CLPTM1-209ENST00000588855 MAL2Q969L2 176 aa17.36■□□□□ 0.37
CLPTM1-209ENST00000588855 SNRNP40Q96DI7 357 aaKnown RBP17.36■□□□□ 0.37
CLPTM1-209ENST00000588855 TRNT1Q96Q11 434 aaKnown RBP17.36■□□□□ 0.37
CLPTM1-209ENST00000588855 UBQLN4Q9NRR5 601 aa17.36■□□□□ 0.37
CLPTM1-209ENST00000588855 THUMPD1Q9NXG2 353 aaKnown RBP17.36■□□□□ 0.37
CLPTM1-209ENST00000588855 WDR45Q9Y484 360 aa17.36■□□□□ 0.37
CLPTM1-209ENST00000588855 HRH3Q9Y5N1 445 aa17.36■□□□□ 0.37
CLPTM1-209ENST00000588855 WIF1Q9Y5W5 379 aa17.36■□□□□ 0.37
CLPTM1-209ENST00000588855 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.36■□□□□ 0.37
CLPTM1-209ENST00000588855 CENPVL1A0A0U1RR11 272 aa17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 LRRC3CA6NJW4 275 aa17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 EIF4E1BA6NMX2 242 aaKnown RBP17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 TTLL8A6PVC2 850 aa17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 NPIPB9F8W1W9 429 aa17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 KIAA0513O60268 411 aa17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 TRIM3O75382 744 aaPredicted RBP17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 NGFRP08138 427 aa17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 TFPTP0C1Z6 253 aa17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 TBXA2RP21731 343 aa17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 GAS1P54826 345 aa17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 MLLT10P55197 1068 aa17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 CHRNEQ04844 493 aa17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 ART3Q13508 389 aa17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 KRT72Q14CN4 511 aa17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 FNDC7Q5VTL7 733 aa17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 HACD2Q6Y1H2 254 aa17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 SLC38A5Q8WUX1 472 aa17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 TMEM19Q96HH6 336 aa17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 ZNF597Q96LX8 424 aa17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 JSRP1Q96MG2 331 aaPredicted RBP17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 GPATCH1Q9BRR8 931 aaKnown RBP17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 SLC38A1Q9H2H9 487 aa17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 KAT8Q9H7Z6 458 aaKnown RBP17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 A4GALTQ9NPC4 353 aa17.35■□□□□ 0.37
CLPTM1-209ENST00000588855 SUV39H1O43463 412 aa17.34■□□□□ 0.37
CLPTM1-209ENST00000588855 SNX4O95219 450 aa17.34■□□□□ 0.37
CLPTM1-209ENST00000588855 ARAFP10398 606 aa17.34■□□□□ 0.37
CLPTM1-209ENST00000588855 SLC6A2P23975 617 aa17.34■□□□□ 0.37
CLPTM1-209ENST00000588855 MASP1P48740 699 aa17.34■□□□□ 0.37
CLPTM1-209ENST00000588855 RNF144AP50876 292 aaPredicted RBP17.34■□□□□ 0.37
CLPTM1-209ENST00000588855 ATP12AP54707 1039 aa17.34■□□□□ 0.37
CLPTM1-209ENST00000588855 RPS26P11Q5JNZ5 115 aaPredicted RBP17.34■□□□□ 0.37
CLPTM1-209ENST00000588855 RNFT1Q5M7Z0 435 aa17.34■□□□□ 0.37
CLPTM1-209ENST00000588855 C8orf82Q6P1X6 216 aaPredicted RBP17.34■□□□□ 0.37
CLPTM1-209ENST00000588855 FAM180AQ6UWF9 173 aa17.34■□□□□ 0.37
CLPTM1-209ENST00000588855 LRRC74BQ6ZQY2 392 aa17.34■□□□□ 0.37
CLPTM1-209ENST00000588855 TRPM8Q7Z2W7 1104 aa17.34■□□□□ 0.37
CLPTM1-209ENST00000588855 HMGN2P46Q86SG4 172 aa17.34■□□□□ 0.37
CLPTM1-209ENST00000588855 MARCH3Q86UD3 253 aa17.34■□□□□ 0.37
CLPTM1-209ENST00000588855 GATSQ8NAP1 163 aa17.34■□□□□ 0.37
CLPTM1-209ENST00000588855 TMEM41AQ96HV5 264 aa17.34■□□□□ 0.37
CLPTM1-209ENST00000588855 TTTY12Q9BZ98 90 aa17.34■□□□□ 0.37
CLPTM1-209ENST00000588855 TBL1XR1Q9BZK7 514 aa17.34■□□□□ 0.37
CLPTM1-209ENST00000588855 SAP130Q9H0E3 1048 aa17.34■□□□□ 0.37
CLPTM1-209ENST00000588855 POLE3Q9NRF9 147 aa17.34■□□□□ 0.37
CLPTM1-209ENST00000588855 KCNE5Q9UJ90 142 aa17.34■□□□□ 0.37
CLPTM1-209ENST00000588855 BOKQ9UMX3 212 aaPredicted RBP17.34■□□□□ 0.37
CLPTM1-209ENST00000588855 FAM166BA8MTA8 275 aa17.33■□□□□ 0.37
CLPTM1-209ENST00000588855 ALG1L2C9J202 215 aa17.33■□□□□ 0.37
CLPTM1-209ENST00000588855 SCDO00767 359 aa17.33■□□□□ 0.37
CLPTM1-209ENST00000588855 GNB5O14775 395 aa17.33■□□□□ 0.37
CLPTM1-209ENST00000588855 SNPHO15079 494 aa17.33■□□□□ 0.37
CLPTM1-209ENST00000588855 GLSO94925 669 aaPredicted RBP17.33■□□□□ 0.37
CLPTM1-209ENST00000588855 GUSBP08236 651 aa17.33■□□□□ 0.37
CLPTM1-209ENST00000588855 HPGDP15428 266 aa17.33■□□□□ 0.37
CLPTM1-209ENST00000588855 CRISP3P54108 245 aa17.33■□□□□ 0.37
CLPTM1-209ENST00000588855 PLGLB1Q02325 96 aa17.33■□□□□ 0.37
CLPTM1-209ENST00000588855 ADRM1Q16186 407 aa17.33■□□□□ 0.37
CLPTM1-209ENST00000588855 CYP51A1Q16850 503 aa17.33■□□□□ 0.37
CLPTM1-209ENST00000588855 PACS2Q86VP3 889 aa17.33■□□□□ 0.37
CLPTM1-209ENST00000588855 PTOV1Q86YD1 416 aa17.33■□□□□ 0.37
CLPTM1-209ENST00000588855 ZNF619Q8N2I2 560 aa17.33■□□□□ 0.37
CLPTM1-209ENST00000588855 OR10A6Q8NH74 314 aa17.33■□□□□ 0.37
CLPTM1-209ENST00000588855 NFKBIDQ8NI38 313 aa17.33■□□□□ 0.37
CLPTM1-209ENST00000588855 SH3GL1Q99961 368 aa17.33■□□□□ 0.37
CLPTM1-209ENST00000588855 HOXD1Q9GZZ0 328 aa17.33■□□□□ 0.37
CLPTM1-209ENST00000588855 QRSL1Q9H0R6 528 aaKnown RBP17.33■□□□□ 0.37
CLPTM1-209ENST00000588855 ZFP64Q9NPA5 681 aa17.33■□□□□ 0.37
CLPTM1-209ENST00000588855 ASF1BQ9NVP2 202 aa17.33■□□□□ 0.37
CLPTM1-209ENST00000588855 SHANK1Q9Y566 2161 aa17.33■□□□□ 0.36
CLPTM1-209ENST00000588855 TMEM247A6NEH6 219 aa17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 B4DXG7 233 aa17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 B8ZZF3 427 aa17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 UGT2B17O75795 530 aa17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 ANGPTL1O95841 491 aa17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 RFPL3SP0C7P2 107 aa17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 ZNF24P17028 368 aa17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 CLK3P49761 638 aaKnown RBP17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 GZMMP51124 257 aa17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 CBX1P83916 185 aa17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 MAPK14Q16539 360 aa17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 PDZK1Q5T2W1 519 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms