RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	SAMD8	Q96LT4	415 aa		3.03	□□□□□ -1.92
PPP4R1-229	ENST00000584754	FAM218A	Q96MZ4	157 aa		3.03	□□□□□ -1.92
PPP4R1-229	ENST00000584754	GPA33	Q99795	319 aa		3.03	□□□□□ -1.92
PPP4R1-229	ENST00000584754	ERVK-6	Q9BXR3	956 aa		3.03	□□□□□ -1.92
PPP4R1-229	ENST00000584754	TRIM15	Q9C019	465 aa		3.03	□□□□□ -1.92
PPP4R1-229	ENST00000584754	DCTPP1	Q9H773	170 aa		3.03	□□□□□ -1.92
PPP4R1-229	ENST00000584754	COG4	Q9H9E3	785 aa		3.03	□□□□□ -1.92
PPP4R1-229	ENST00000584754	GTSE1	Q9NYZ3	720 aa		3.03	□□□□□ -1.92
PPP4R1-229	ENST00000584754	SPAST	Q9UBP0	616 aa		3.03	□□□□□ -1.92
PPP4R1-229	ENST00000584754	RARRES3	Q9UL19	164 aa		3.03	□□□□□ -1.92
PPP4R1-229	ENST00000584754	MGAT4A	Q9UM21	535 aa		3.03	□□□□□ -1.92
PPP4R1-229	ENST00000584754	SLC9A8	Q9Y2E8	581 aa		3.03	□□□□□ -1.92
PPP4R1-229	ENST00000584754	MYH4	Q9Y623	1939 aa		3.03	□□□□□ -1.92
PPP4R1-229	ENST00000584754	COL4A6	Q14031	1691 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	ASTN1	O14525	1302 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	IGHV3-38	A0A0C4DH36	116 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754		A0A0J9YWU9	116 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	NDC80	O14777	642 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	IDH3B	O43837	385 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	FLOT1	O75955	427 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	SLC25A27	O95847	323 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	FH	P07954	510 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	B4GALT1	P15291	398 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	CCL11	P51671	97 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	ZNF131	P52739	623 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	LIMK2	P53671	638 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	YBEY	P58557	167 aa	Predicted RBP	3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	DYNLL1	P63167	89 aa	Known RBP	3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	FKBP3	Q00688	224 aa	Known RBP	3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	BEX3	Q00994	111 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	BNIP1	Q12981	228 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	CALCOCO2	Q13137	446 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	EMC2	Q15006	297 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	NECTIN1	Q15223	517 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	TAF1B	Q53T94	588 aa	Predicted RBP	3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	C2CD6	Q53TS8	623 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	LRRC8B	Q6P9F7	803 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	CXCL17	Q6UXB2	119 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	GDPGP1	Q6ZNW5	385 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754		Q6ZRP5	223 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	TMCO2	Q7Z6W1	182 aa	Predicted RBP	3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	DEFB128	Q7Z7B8	93 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	SYVN1	Q86TM6	617 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	BANP	Q8N9N5	519 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	OR56B1	Q8NGI3	324 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	OR1B1	Q8NGR6	318 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	TMEM45B	Q96B21	275 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	TBC1D31	Q96DN5	1066 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	MOCOS	Q96EN8	888 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	ATXN7L3B	Q96GX2	97 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	C16orf45	Q96MC5	204 aa	Predicted RBP	3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	TAAR6	Q96RI8	345 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	ZNF577	Q9BSK1	485 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	NDUFAF3	Q9BU61	184 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	FICD	Q9BVA6	458 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	RAB11FIP5	Q9BXF6	653 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	WDR41	Q9HAD4	459 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	PLEKHA3	Q9HB20	300 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	DEPP	Q9NTK1	212 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	TAS2R3	Q9NYW6	316 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	NINJ2	Q9NZG7	142 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	TMEM181	Q9P2C4	612 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	EIF3K	Q9UBQ5	218 aa	Known RBP	3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	DHRS7	Q9Y394	339 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754		U3KQV3	271 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	TENM4	Q6N022	2769 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	COL12A1	Q99715	3063 aa		3.02	□□□□□ -1.93
PPP4R1-229	ENST00000584754	SDK1	Q7Z5N4	2213 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	SPTA1	P02549	2419 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	USP9X	Q93008	2570 aa	Predicted RBP	3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	LOC390937	A0A1W2PQ73	354 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	IGLON5	A6NGN9	336 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754		A8MU76	341 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	NEDD8-MDP1	E9PL57	170 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754		H3BTX0	84 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	B4GAT1	O43505	415 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	CS	O75390	466 aa	Known RBP	3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	CABYR	O75952	493 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	PROS1	P07225	676 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	SLC35G4	P0C7Q5	338 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	GHR	P10912	638 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	TNNI3	P19429	210 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	SPR	P35270	261 aa	Predicted RBP	3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	GPC3	P51654	580 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	SLC7A2	P52569	658 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	SLC26A5	P58743	744 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	RPL27	P61353	136 aa	Known RBP	3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	KLF5	Q13887	457 aa	Predicted RBP	3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	BTG3	Q14201	252 aa	Predicted RBP	3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	ZNF146	Q15072	292 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	KNOP1	Q1ED39	458 aa	Known RBP	3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	PARP6	Q2NL67	630 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	CMPK2	Q5EBM0	449 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	VWA2	Q5GFL6	755 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	OLFML2A	Q68BL7	652 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	WDR88	Q6ZMY6	472 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	GTSCR1	Q86UQ5	136 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	GPBP1	Q86WP2	473 aa		3.01	□□□□□ -1.93
PPP4R1-229	ENST00000584754	FAM131B	Q86XD5	332 aa		3.01	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms