RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 RAB3IPQ96QF0 476 aaPredicted RBP16.83■□□□□ 0.28
RFFL-211ENST00000584541 SECISBP2Q96T21 854 aaKnown RBP16.83■□□□□ 0.28
RFFL-211ENST00000584541 DSPPQ9NZW4 1301 aa16.83■□□□□ 0.28
RFFL-211ENST00000584541 ZNF232Q9UNY5 417 aa16.83■□□□□ 0.28
RFFL-211ENST00000584541 SNX13Q9Y5W8 968 aa16.83■□□□□ 0.28
RFFL-211ENST00000584541 IGF2RP11717 2491 aa16.82■□□□□ 0.28
RFFL-211ENST00000584541 DBIP07108 87 aaKnown RBP16.82■□□□□ 0.28
RFFL-211ENST00000584541 NGFRP08138 427 aa16.82■□□□□ 0.28
RFFL-211ENST00000584541 IL7RP16871 459 aa16.82■□□□□ 0.28
RFFL-211ENST00000584541 TBXA2RP21731 343 aa16.82■□□□□ 0.28
RFFL-211ENST00000584541 MSX2P35548 267 aaPredicted RBP16.82■□□□□ 0.28
RFFL-211ENST00000584541 CD96P40200 585 aa16.82■□□□□ 0.28
RFFL-211ENST00000584541 PCBP3P57721 371 aaKnown RBP16.82■□□□□ 0.28
RFFL-211ENST00000584541 TRIM25Q14258 630 aaKnown RBP16.82■□□□□ 0.28
RFFL-211ENST00000584541 GRAMD1BQ3KR37 738 aa16.82■□□□□ 0.28
RFFL-211ENST00000584541 ZNF468Q5VIY5 522 aaPredicted RBP16.82■□□□□ 0.28
RFFL-211ENST00000584541 SLC22A10Q63ZE4 541 aa16.82■□□□□ 0.28
RFFL-211ENST00000584541 PGM2L1Q6PCE3 622 aa16.82■□□□□ 0.28
RFFL-211ENST00000584541 IGFL2Q6UWQ7 119 aa16.82■□□□□ 0.28
RFFL-211ENST00000584541 ZNF771Q7L3S4 317 aaPredicted RBP16.82■□□□□ 0.28
RFFL-211ENST00000584541 ZNF614Q8N883 585 aa16.82■□□□□ 0.28
RFFL-211ENST00000584541 OR10G3Q8NGC4 313 aa16.82■□□□□ 0.28
RFFL-211ENST00000584541 ASB9Q96DX5 294 aa16.82■□□□□ 0.28
RFFL-211ENST00000584541 TBL1XR1Q9BZK7 514 aa16.82■□□□□ 0.28
RFFL-211ENST00000584541 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.82■□□□□ 0.287e-7■□□□□ 9.5
RFFL-211ENST00000584541 PRORYQ9H606 182 aa16.82■□□□□ 0.28
RFFL-211ENST00000584541 METTL7AQ9H8H3 244 aa16.82■□□□□ 0.28
RFFL-211ENST00000584541 TIMMDC1Q9NPL8 285 aa16.82■□□□□ 0.28
RFFL-211ENST00000584541 PLA2G3Q9NZ20 509 aa16.82■□□□□ 0.28
RFFL-211ENST00000584541 CNIH4Q9P003 139 aa16.82■□□□□ 0.28
RFFL-211ENST00000584541 SEC14L3Q9UDX4 400 aa16.82■□□□□ 0.28
RFFL-211ENST00000584541 ABCG2Q9UNQ0 655 aa16.82■□□□□ 0.28
RFFL-211ENST00000584541 IFT52Q9Y366 437 aa16.82■□□□□ 0.28
RFFL-211ENST00000584541 GPC6Q9Y625 555 aaPredicted RBP16.82■□□□□ 0.28
RFFL-211ENST00000584541 EML6Q6ZMW3 1958 aa16.82■□□□□ 0.28
RFFL-211ENST00000584541 TNRC6AQ8NDV7 1962 aaKnown RBP16.82■□□□□ 0.28
RFFL-211ENST00000584541 NPIPA5A0A0B4J1W7 369 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 NPIPA7E9PJI5 369 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 H3BNH8 94 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 CIB2O75838 187 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 ZIC2O95409 532 aaPredicted RBP16.81■□□□□ 0.28
RFFL-211ENST00000584541 OXSR1O95747 527 aaPredicted RBP16.81■□□□□ 0.28
RFFL-211ENST00000584541 F10P00742 488 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 P04436 131 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 NPIPA8P0DM63 369 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 NCK1P16333 377 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 KDELR2P33947 212 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 EVI2BP34910 448 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 TRAP1Q12931 704 aaKnown RBP16.81■□□□□ 0.28
RFFL-211ENST00000584541 LARS2Q15031 903 aaKnown RBP16.81■□□□□ 0.28
RFFL-211ENST00000584541 OR1C1Q15619 314 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 ZNF141Q15928 474 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 FXNQ16595 210 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 LRRC23Q53EV4 343 aaPredicted RBP16.81■□□□□ 0.28
RFFL-211ENST00000584541 ARMC8Q8IUR7 673 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 ZADH2Q8N4Q0 377 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 OR4C3Q8NH37 302 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 OR52P1PQ8NH57 321 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 WDR60Q8WVS4 1066 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 RASSF5Q8WWW0 418 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 CNTNAP3BQ96NU0 1288 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 NODALQ96S42 347 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 CNTNAP3Q9BZ76 1288 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 QRSL1Q9H0R6 528 aaKnown RBP16.81■□□□□ 0.28
RFFL-211ENST00000584541 PCDHAC1Q9H158 963 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 ARMC7Q9H6L4 198 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 HHATLQ9HCP6 504 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 KLRF1Q9NZS2 232 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 ACTR3BQ9P1U1 418 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 DTNAQ9Y4J8 743 aa16.81■□□□□ 0.28
RFFL-211ENST00000584541 PRAMEF25A6NGN4 478 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 AGAP5A6NIR3 686 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 NPIPB9F8W1W9 429 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 M0QX08 132 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 ARPC2O15144 300 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 UGT2B17O75795 530 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 SORBS2O94875 1100 aaKnown RBP16.8■□□□□ 0.28
RFFL-211ENST00000584541 THBS1P07996 1170 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 CD46P15529 392 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 ENDOUP21128 410 aaKnown RBP16.8■□□□□ 0.28
RFFL-211ENST00000584541 LIN52Q52LA3 116 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 ZNF311Q5JNZ3 666 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 TBCELQ5QJ74 424 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 PDZK1Q5T2W1 519 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 DESI1Q6ICB0 168 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 TMEM81Q6P7N7 255 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 DHFR2Q86XF0 187 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 BHLHE22Q8NFJ8 381 aaPredicted RBP16.8■□□□□ 0.28
RFFL-211ENST00000584541 PAQR8Q8TEZ7 354 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 LRGUKQ96M69 825 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 NSMCE2Q96MF7 247 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 C5orf34Q96MH7 638 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 RNF145Q96MT1 663 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 TRIM15Q9C019 465 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 GORASP2Q9H8Y8 452 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 SDHAF3Q9NRP4 125 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.8■□□□□ 0.28
RFFL-211ENST00000584541 SACM1LQ9NTJ5 587 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 ADPRHL2Q9NX46 363 aa16.8■□□□□ 0.28
RFFL-211ENST00000584541 FLRT3Q9NZU0 649 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms