RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	KLK6	Q92876	244 aa		10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	TMEM159	Q96B96	161 aa		10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	ZNF556	Q9HAH1	456 aa		10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	CD3G	P09693	182 aa		10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	ZNF8	P17098	575 aa	Predicted RBP	10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	VIPR1	P32241	457 aa		10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	TAS2R50	P59544	299 aa		10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	TMEM115	Q12893	351 aa	Predicted RBP	10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	RPA4	Q13156	261 aa		10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	KCNAB1	Q14722	419 aa		10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	SSX1	Q16384	188 aa		10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	PLEKHS1	Q5SXH7	462 aa		10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	HENMT1	Q5T8I9	393 aa	Known RBP	10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	LIPK	Q5VXJ0	399 aa		10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	SHF	Q7M4L6	423 aa		10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	ZFP41	Q8N8Y5	198 aa		10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	THAP3	Q8WTV1	239 aa	Predicted RBP	10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	ZNF480	Q8WV37	535 aa		10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	OR8D1	Q8WZ84	308 aa		10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	PITX2	Q99697	317 aa		10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	PRR14	Q9BWN1	585 aa		10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	OR2AG1	Q9H205	316 aa		10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	IL20RA	Q9UHF4	553 aa		10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	NUP50	Q9UKX7	468 aa		10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	SNX11	Q9Y5W9	270 aa		10.89	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063		A0A1B0GV90	55 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	C1orf226	A1L170	272 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	GADD45G	O95257	159 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	MPC1L	P0DKB6	136 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	TBPL1	P62380	186 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	FADD	Q13158	208 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	SLAMF1	Q13291	335 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	SLBP	Q14493	270 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	PDGFRL	Q15198	375 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	HNRNPA1L2	Q32P51	320 aa	Known RBP	10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	C9orf64	Q5T6V5	341 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	ANKRD54	Q6NXT1	300 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	DEF8	Q6ZN54	512 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	MCAT	Q8IVS2	390 aa	Known RBP	10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	TNFRSF14	Q92956	283 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	UCN3	Q969E3	161 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	BARHL1	Q9BZE3	327 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	ACTR6	Q9GZN1	396 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	NPFFR2	Q9Y5X5	522 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063		A0A087X0M5	115 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063		A0A1B0GX30	115 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	TRBC2	A0A5B9	178 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	DYRK3	O43781	588 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	SLCO2B1	O94956	709 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	ALPPL2	P10696	532 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	LAMP2	P13473	410 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	CPN2	P22792	545 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	FCAR	P24071	287 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	CHM	P24386	653 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	HNRNPF	P52597	415 aa	Known RBP	10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	TBCE	Q15813	527 aa	Predicted RBP	10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	MICA	Q29983	383 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	TMEM44	Q2T9K0	475 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	IFI44L	Q53G44	452 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	ATAD3C	Q5T2N8	411 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	C6orf15	Q6UXA7	325 aa	Predicted RBP	10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	ZNF813	Q6ZN06	617 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	TRAPPC5	Q8IUR0	188 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	ZNF578	Q96N58	590 aa	Predicted RBP	10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	COL21A1	Q96P44	957 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	FYTTD1	Q96QD9	318 aa	Known RBP	10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	KCNK17	Q96T54	332 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	TRMT61B	Q9BVS5	477 aa	Known RBP	10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	ASPN	Q9BXN1	380 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	RSPO3	Q9BXY4	272 aa	Predicted RBP	10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	CHST8	Q9H2A9	424 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	TOR4A	Q9NXH8	423 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	TEX51	A0A1B0GUA7	166 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	BTBD17	A6NE02	478 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	SPINT1	O43278	529 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	SERPINI2	O75830	405 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	PRNP	P04156	253 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	IFNA16	P05015	189 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	COL9A1	P20849	921 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	PRPH2	P23942	346 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	LUM	P51884	338 aa	Predicted RBP	10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	MVD	P53602	400 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	PSPH	P78330	225 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	CNTN1	Q12860	1018 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	CCDC85B	Q15834	202 aa	Predicted RBP	10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	ZNF181	Q2M3W8	571 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	PNCK	Q6P2M8	343 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	LIPI	Q6XZB0	460 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	RNF165	Q6ZSG1	346 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	COMMD6	Q7Z4G1	85 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	UBASH3B	Q8TF42	649 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	BTN2A2	Q8WVV5	523 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	GLYATL1	Q969I3	302 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	ARRDC3	Q96B67	414 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	EPYC	Q99645	322 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	POTEKP	Q9BYX7	375 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	MKRN2	Q9H000	416 aa	Known RBP	10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	OPA3	Q9H6K4	179 aa		10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	NMNAT1	Q9HAN9	279 aa	Predicted RBP	10.88	□□□□□ -0.67
CDK5RAP3-231	ENST00000584063	CPNE5	Q9HCH3	593 aa		10.88	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms