RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 TROVE2P10155 538 aaKnown RBP eCLIP14.23□□□□□ -0.13
SKA2-209ENST00000583976 IDO1P14902 403 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 DDX5P17844 614 aaKnown RBP14.23□□□□□ -0.13
SKA2-209ENST00000583976 PTGDSP41222 190 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 MC3RP41968 323 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 TMED10P49755 219 aaKnown RBP14.23□□□□□ -0.13
SKA2-209ENST00000583976 ADAM8P78325 824 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 FOXF2Q12947 444 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 FBXW10Q5XX13 1052 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 OR4F3Q6IEY1 312 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 CGB2Q6NT52 195 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 FAM83FQ8NEG4 500 aaPredicted RBP14.23□□□□□ -0.13
SKA2-209ENST00000583976 OR7G2Q8NG99 324 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 OR7G1Q8NGA0 311 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 MBD3L2Q8NHZ7 208 aaPredicted RBP14.23□□□□□ -0.13
SKA2-209ENST00000583976 ZNF675Q8TD23 568 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 TP53INP1Q96A56 240 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 CTHRC1Q96CG8 243 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 NTNG2Q96CW9 530 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 COQ8BQ96D53 544 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 ZBED6CLQ96FA7 236 aaPredicted RBP14.23□□□□□ -0.13
SKA2-209ENST00000583976 ZNF764Q96H86 408 aaPredicted RBP14.23□□□□□ -0.13
SKA2-209ENST00000583976 TMEM41AQ96HV5 264 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 NODALQ96S42 347 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 SMR3AQ99954 134 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 CCDC28BQ9BUN5 200 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 DUSP26Q9BV47 211 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 METTL7AQ9H8H3 244 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 SERHLQ9NQF3 203 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 ATAD3AQ9NVI7 634 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 ZNF629Q9UEG4 869 aaPredicted RBP14.23□□□□□ -0.13
SKA2-209ENST00000583976 ZNF639Q9UID6 485 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 MAPRE3Q9UPY8 281 aa14.23□□□□□ -0.13
SKA2-209ENST00000583976 NSD1Q96L73 2696 aaPredicted RBP14.22□□□□□ -0.13
SKA2-209ENST00000583976 TUBAL3A6NHL2 446 aa14.22□□□□□ -0.13
SKA2-209ENST00000583976 CD8B2A6NJW9 211 aa14.22□□□□□ -0.13
SKA2-209ENST00000583976 CAPN14A8MX76 684 aa14.22□□□□□ -0.13
SKA2-209ENST00000583976 SNX4O95219 450 aa14.22□□□□□ -0.13
SKA2-209ENST00000583976 IL12AP29459 219 aa14.22□□□□□ -0.13
SKA2-209ENST00000583976 NRG3P56975 720 aa14.22□□□□□ -0.13
SKA2-209ENST00000583976 C21orf58P58505 322 aa14.22□□□□□ -0.13
SKA2-209ENST00000583976 GSTA3Q16772 222 aa14.22□□□□□ -0.13
SKA2-209ENST00000583976 NHSL2Q5HYW2 709 aa14.22□□□□□ -0.13
SKA2-209ENST00000583976 TIGD3Q6B0B8 471 aa14.22□□□□□ -0.13
SKA2-209ENST00000583976 PACS2Q86VP3 889 aa14.22□□□□□ -0.13
SKA2-209ENST00000583976 KRTAP1-3Q8IUG1 177 aa14.22□□□□□ -0.13
SKA2-209ENST00000583976 PM20D2Q8IYS1 436 aa14.22□□□□□ -0.13
SKA2-209ENST00000583976 ZFP28Q8NHY6 868 aa14.22□□□□□ -0.13
SKA2-209ENST00000583976 HGDQ93099 445 aa14.22□□□□□ -0.13
SKA2-209ENST00000583976 ABTB1Q969K4 478 aaPredicted RBP14.22□□□□□ -0.13
SKA2-209ENST00000583976 ZNF317Q96PQ6 595 aaPredicted RBP14.22□□□□□ -0.13
SKA2-209ENST00000583976 TUBA1CQ9BQE3 449 aa14.22□□□□□ -0.13
SKA2-209ENST00000583976 OSBPL11Q9BXB4 747 aa14.22□□□□□ -0.13
SKA2-209ENST00000583976 BHLHE41Q9C0J9 482 aaPredicted RBP14.22□□□□□ -0.13
SKA2-209ENST00000583976 RPH3AQ9Y2J0 694 aaPredicted RBP14.22□□□□□ -0.13
SKA2-209ENST00000583976 CLCA1A8K7I4 914 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 C17orf51A8MQB3 221 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 SNPHO15079 494 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 CFLARO15519 480 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 UGT2B11O75310 529 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 PPM1BO75688 479 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 SLC22A3O75751 556 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 C6orf47O95873 294 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 RAF1P04049 648 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 ABCB1P08183 1280 aaPredicted RBP14.21□□□□□ -0.13
SKA2-209ENST00000583976 TMIGD3P0DMS9 266 aaPredicted RBP14.21□□□□□ -0.13
SKA2-209ENST00000583976 NCF2P19878 526 aaPredicted RBP14.21□□□□□ -0.13
SKA2-209ENST00000583976 TCEA1P23193 301 aaKnown RBP14.21□□□□□ -0.13
SKA2-209ENST00000583976 PEX19P40855 299 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 FRKP42685 505 aaPredicted RBP14.21□□□□□ -0.13
SKA2-209ENST00000583976 CLNS1AP54105 237 aaKnown RBP14.21□□□□□ -0.13
SKA2-209ENST00000583976 PRKAG1P54619 331 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 PLCXD2Q0VAA5 305 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 DEFB113Q30KQ7 82 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 FAM174BQ3ZCQ3 159 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 PDCD4Q53EL6 469 aaKnown RBP14.21□□□□□ -0.13
SKA2-209ENST00000583976 SPANXN4Q5MJ08 99 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 SZRD1Q7Z422 152 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 GCNT2Q8N0V5 402 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 MBD6Q96DN6 1003 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 OMA1Q96E52 524 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 ELP4Q96EB1 424 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 SECISBP2Q96T21 854 aaKnown RBP14.21□□□□□ -0.13
SKA2-209ENST00000583976 ZBTB18Q99592 522 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 SIKE1Q9BRV8 207 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 TMEM120AQ9BXJ8 343 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 ACSS1Q9NUB1 689 aaPredicted RBP14.21□□□□□ -0.13
SKA2-209ENST00000583976 DDX18Q9NVP1 670 aaKnown RBP14.21□□□□□ -0.13
SKA2-209ENST00000583976 GALNT8Q9NY28 637 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 JKAMPQ9P055 326 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 SNX8Q9Y5X2 465 aa14.21□□□□□ -0.13
SKA2-209ENST00000583976 H0Y3Z8 333 aa14.2□□□□□ -0.14
SKA2-209ENST00000583976 UPK1AO00322 258 aa14.2□□□□□ -0.14
SKA2-209ENST00000583976 PLOD3O60568 738 aa14.2□□□□□ -0.14
SKA2-209ENST00000583976 BCAS2O75934 225 aaPredicted RBP14.2□□□□□ -0.14
SKA2-209ENST00000583976 CTSSP25774 331 aa14.2□□□□□ -0.14
SKA2-209ENST00000583976 S100A3P33764 101 aa14.2□□□□□ -0.14
SKA2-209ENST00000583976 EMDP50402 254 aa14.2□□□□□ -0.14
SKA2-209ENST00000583976 ARFIP2P53365 341 aa14.2□□□□□ -0.14
SKA2-209ENST00000583976 SEC24CP53992 1094 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms