RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 SYPP08247 313 aa21.05■□□□□ 0.96
CCDC47-204ENST00000582252 ST3GAL4Q11206 333 aa21.05■□□□□ 0.96
CCDC47-204ENST00000582252 MEDAGQ5VYS4 303 aa21.05■□□□□ 0.96
CCDC47-204ENST00000582252 POLDIP3Q9BY77 421 aaKnown RBP21.05■□□□□ 0.96
CCDC47-204ENST00000582252 RBCK1Q9BYM8 510 aa21.05■□□□□ 0.96
CCDC47-204ENST00000582252 SLC25A19Q9HC21 320 aa21.05■□□□□ 0.96
CCDC47-204ENST00000582252 ASXL3Q9C0F0 2248 aa21.05■□□□□ 0.96
CCDC47-204ENST00000582252 TTC36A6NLP5 189 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 M0R129 80 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 ZNF749O43361 778 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 DUX1O43812 170 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 MAN1A2O60476 641 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 BRINP1O60477 761 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 BCAS1O75363 584 aaPredicted RBP21.04■□□□□ 0.96
CCDC47-204ENST00000582252 TP53P04637 393 aaPredicted RBP21.04■□□□□ 0.96
CCDC47-204ENST00000582252 TRHRP34981 398 aaPredicted RBP21.04■□□□□ 0.96
CCDC47-204ENST00000582252 ARL4DP49703 201 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 HSD17B7P56937 341 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 SERTAD2Q14140 314 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 AP1ARQ63HQ0 302 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 RASSF6Q6ZTQ3 369 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 PLXDC1Q8IUK5 500 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 DOK4Q8TEW6 326 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 DUSP23Q9BVJ7 150 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 TEX12Q9BXU0 123 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 ALOXE3Q9BYJ1 711 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 GAREM1Q9H706 876 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 C14orf105Q9NVL8 296 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 NLGN3Q9NZ94 848 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 RPL36Q9Y3U8 105 aaKnown RBP21.04■□□□□ 0.96
CCDC47-204ENST00000582252 WDR87Q6ZQQ6 2873 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 CLDN24A6NM45 220 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 PATE3B3GLJ2 98 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 FMO6PO60774 539 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 PRAMEF2O60811 474 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 STSP08842 583 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 CDK4P11802 303 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 C21orf33P30042 268 aaPredicted RBP21.04■□□□□ 0.96
CCDC47-204ENST00000582252 GALNSP34059 522 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 MPLP40238 635 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 STAT5AP42229 794 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 GPR3P46089 330 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 CDK5Q00535 292 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 DCTN2Q13561 401 aaKnown RBP21.04■□□□□ 0.96
CCDC47-204ENST00000582252 OCLNQ16625 522 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 ZSWIM7Q19AV6 140 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 GDF7Q7Z4P5 450 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 SH3GL3Q99963 347 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 CDCA4Q9BXL8 241 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 FOLH1BQ9HBA9 442 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 FSCN3Q9NQT6 498 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 TESQ9UGI8 421 aaKnown RBP21.04■□□□□ 0.96
CCDC47-204ENST00000582252 R4GN57 208 aa21.04■□□□□ 0.96
CCDC47-204ENST00000582252 FRYLO94915 3013 aa21.03■□□□□ 0.96
CCDC47-204ENST00000582252 UNC13CQ8NB66 2214 aa21.03■□□□□ 0.96
CCDC47-204ENST00000582252 RP1P56715 2156 aa21.03■□□□□ 0.96
CCDC47-204ENST00000582252 ARHGAP33O14559 1287 aa21.03■□□□□ 0.96
CCDC47-204ENST00000582252 MED26O95402 600 aa21.03■□□□□ 0.96
CCDC47-204ENST00000582252 LCKP06239 509 aa21.03■□□□□ 0.96
CCDC47-204ENST00000582252 GIMD1P0DJR0 217 aa21.03■□□□□ 0.96
CCDC47-204ENST00000582252 ZNF182P17025 639 aaPredicted RBP21.03■□□□□ 0.96
CCDC47-204ENST00000582252 STT3AP46977 705 aa21.03■□□□□ 0.96
CCDC47-204ENST00000582252 GIPRP48546 466 aa21.03■□□□□ 0.96
CCDC47-204ENST00000582252 GPLD1P80108 840 aa21.03■□□□□ 0.96
CCDC47-204ENST00000582252 GINS1Q14691 196 aa21.03■□□□□ 0.96
CCDC47-204ENST00000582252 CTF1Q16619 201 aa21.03■□□□□ 0.96
CCDC47-204ENST00000582252 MRPL2Q5T653 305 aaKnown RBP21.03■□□□□ 0.96
CCDC47-204ENST00000582252 FIGNL1Q6PIW4 674 aa21.03■□□□□ 0.96
CCDC47-204ENST00000582252 MBOAT2Q6ZWT7 520 aa21.03■□□□□ 0.96
CCDC47-204ENST00000582252 ZNF367Q7RTV3 350 aa21.03■□□□□ 0.96
CCDC47-204ENST00000582252 KANSL1Q7Z3B3 1105 aa21.03■□□□□ 0.96
CCDC47-204ENST00000582252 C7orf57Q8NEG2 295 aa21.03■□□□□ 0.96
CCDC47-204ENST00000582252 SAP25Q8TEE9 199 aa21.03■□□□□ 0.96
CCDC47-204ENST00000582252 DTNBP1Q96EV8 351 aa21.03■□□□□ 0.96
CCDC47-204ENST00000582252 IL4I1Q96RQ9 567 aa21.03■□□□□ 0.96
CCDC47-204ENST00000582252 TVP23BQ9NYZ1 205 aa21.03■□□□□ 0.96
CCDC47-204ENST00000582252 HEMK1Q9Y5R4 338 aaPredicted RBP21.03■□□□□ 0.96
CCDC47-204ENST00000582252 TRAPPC13A5PLN9 417 aa21.02■□□□□ 0.96
CCDC47-204ENST00000582252 ENTPD6O75354 484 aa21.02■□□□□ 0.96
CCDC47-204ENST00000582252 IGFBP1P08833 259 aaPredicted RBP21.02■□□□□ 0.96
CCDC47-204ENST00000582252 GLB1P16278 677 aa21.02■□□□□ 0.96
CCDC47-204ENST00000582252 FPR3P25089 353 aa21.02■□□□□ 0.96
CCDC47-204ENST00000582252 SLC15A1P46059 708 aa21.02■□□□□ 0.96
CCDC47-204ENST00000582252 PCYT1AP49585 367 aa21.02■□□□□ 0.96
CCDC47-204ENST00000582252 IRF3Q14653 427 aa21.02■□□□□ 0.96
CCDC47-204ENST00000582252 TIGD6Q17RP2 521 aa21.02■□□□□ 0.96
CCDC47-204ENST00000582252 FLYWCH1Q4VC44 716 aa21.02■□□□□ 0.96
CCDC47-204ENST00000582252 SLC25A30Q5SVS4 291 aa21.02■□□□□ 0.96
CCDC47-204ENST00000582252 MFSD4BQ5TF39 518 aa21.02■□□□□ 0.96
CCDC47-204ENST00000582252 SLC27A4Q6P1M0 643 aa21.02■□□□□ 0.96
CCDC47-204ENST00000582252 PRICKLE2Q7Z3G6 844 aa21.02■□□□□ 0.96
CCDC47-204ENST00000582252 MVB12AQ96EY5 273 aa21.02■□□□□ 0.96
CCDC47-204ENST00000582252 PRR14Q9BWN1 585 aa21.02■□□□□ 0.96
CCDC47-204ENST00000582252 COL25A1Q9BXS0 654 aaPredicted RBP21.02■□□□□ 0.96
CCDC47-204ENST00000582252 IGHV1OR21-1A0A087WYE8 117 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 CDHR4A6H8M9 788 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 SNTNA6NMZ2 147 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 KCNK2O95069 426 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 CD36P16671 472 aa21.01■□□□□ 0.95
CCDC47-204ENST00000582252 S1PR1P21453 382 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms