RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	SGCB	Q16585	318 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	FRMD7	Q6ZUT3	714 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	C22orf34	Q6ZV56	151 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	CIART	Q8N365	385 aa	Predicted RBP	10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	CEP112	Q8N8E3	955 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	CCDC63	Q8NA47	563 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	CLHC1	Q8NHS4	586 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	GPR151	Q8TDV0	419 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	OTUB1	Q96FW1	271 aa	Predicted RBP	10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	PERP	Q96FX8	193 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	CCL19	Q99731	98 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	NPAS1	Q99742	590 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	SLC39A3	Q9BRY0	314 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	LMF2	Q9BU23	707 aa	Known RBP	10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	RNF122	Q9H9V4	155 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	SIRT5	Q9NXA8	310 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	DCDC2	Q9UHG0	476 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	MRTO4	Q9UKD2	239 aa	Known RBP	10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	GRID1	Q9ULK0	1009 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	PROCR	Q9UNN8	238 aa		10.46	□□□□□ -0.73
CDK5RAP3-223	ENST00000582114	C16orf97	H3BN30	126 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114		H7C1Q1	480 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	EIF1AY	O14602	144 aa	Known RBP	10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	PDPK1	O15530	556 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	EMC8	O43402	210 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	GLRA3	O75311	464 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	RSL1D1	O76021	490 aa	Known RBP	10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	KCNH1	O95259	989 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	PROC	P04070	461 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	SHBG	P04278	402 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	CRYGS	P22914	178 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	RPS3A	P61247	264 aa	Known RBP	10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	ACKR1	Q16570	336 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	ZNF385B	Q569K4	471 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	SHE	Q5VZ18	495 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	FIGNL1	Q6PIW4	674 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	TRIM46	Q7Z4K8	759 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	ZAR1	Q86SH2	424 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	GGN	Q86UU5	652 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	IFT20	Q8IY31	132 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114		Q96MF0	132 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	TSSK3	Q96PN8	268 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	KLHDC3	Q9BQ90	382 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	PRRG4	Q9BZD6	226 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	TMEM185B	Q9H7F4	350 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	RRAGD	Q9NQL2	400 aa	Predicted RBP	10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	TAS2R7	Q9NYW3	318 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	ZNF175	Q9Y473	711 aa		10.45	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	ARHGEF9	O43307	516 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	PLIN3	O60664	434 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	SLITRK5	O94991	958 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	PLG	P00747	810 aa	Predicted RBP	10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	UROS	P10746	265 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	ACP2	P11117	423 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	PRPS2	P11908	318 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	RNF144A	P50876	292 aa	Predicted RBP	10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	PSMD4	P55036	377 aa	Known RBP	10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	C17orf67	Q0P5P2	114 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	ALKBH2	Q6NS38	261 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	IKBIP	Q70UQ0	350 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	YTHDF3	Q7Z739	585 aa	Known RBP	10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	METTL25	Q8N6Q8	603 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	NUP43	Q8NFH3	380 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	OR4C3	Q8NH37	302 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	OR10D3	Q8NH80	312 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	FAM76A	Q8TAV0	307 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	CCDC126	Q96EE4	140 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	SH3YL1	Q96HL8	342 aa	Predicted RBP	10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	TXLNGY	Q9BZA5	131 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	C3orf14	Q9HBI5	128 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	LRTM1	Q9HBL6	345 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	FBXO34	Q9NWN3	711 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	ELOVL5	Q9NYP7	299 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	SH3BP4	Q9P0V3	963 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	BAIAP2L1	Q9UHR4	511 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	CCL27	Q9Y4X3	112 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	AP4B1	Q9Y6B7	739 aa		10.44	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	TRIM64	A6NGJ6	449 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	TRIM64B	A6NI03	449 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	LINC01387	J3KSC0	135 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	TNFSF11	O14788	317 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	NDUFB5	O43674	189 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	CXCL13	O43927	109 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	OXSR1	O95747	527 aa	Predicted RBP	10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	LY6G6D	O95868	133 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	LINC00032	P0C843	101 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	CD8B	P10966	210 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	CPA3	P15088	417 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	SDC1	P18827	310 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	TBXA2R	P21731	343 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	MANF	P55145	182 aa	Known RBP	10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	CTBP2	P56545	445 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	RPL38	P63173	70 aa	Known RBP	10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	PRR5	P85299	388 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	KIAA0040	Q15053	153 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	GUSBP1	Q15486	140 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	CCNJ	Q5T5M9	372 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	SH2D5	Q6ZV89	423 aa		10.43	□□□□□ -0.74
CDK5RAP3-223	ENST00000582114	FAM214B	Q7L5A3	538 aa		10.43	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms