RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 ELOA3Q8NG57 546 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 PIWIL2Q8TC59 973 aaKnown RBP11.34□□□□□ -0.59
SS18-219ENST00000581570 MTBPQ96DY7 904 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 ADGRG7Q96K78 797 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 ELOVL6Q9H5J4 265 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 TAS2R9Q9NYW1 312 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 CPSF2Q9P2I0 782 aaKnown RBP11.34□□□□□ -0.59
SS18-219ENST00000581570 SNX12Q9UMY4 172 aa11.34□□□□□ -0.59
SS18-219ENST00000581570 CCDC189A1A4V9 331 aa11.33□□□□□ -0.6
SS18-219ENST00000581570 PLOD3O60568 738 aa11.33□□□□□ -0.6
SS18-219ENST00000581570 RAMP1O60894 148 aa11.33□□□□□ -0.6
SS18-219ENST00000581570 NTN1O95631 604 aa11.33□□□□□ -0.6
SS18-219ENST00000581570 OPN1LWP04000 364 aa11.33□□□□□ -0.6
SS18-219ENST00000581570 IGHV4-31P0DP07 118 aa11.33□□□□□ -0.6
SS18-219ENST00000581570 ZNF16P17020 682 aaPredicted RBP11.33□□□□□ -0.6
SS18-219ENST00000581570 C21orf58P58505 322 aa11.33□□□□□ -0.6
SS18-219ENST00000581570 IRX1P78414 480 aaPredicted RBP11.33□□□□□ -0.6
SS18-219ENST00000581570 PSG6Q00889 435 aa11.33□□□□□ -0.6
SS18-219ENST00000581570 IRF9Q00978 393 aa11.33□□□□□ -0.6
SS18-219ENST00000581570 C17orf67Q0P5P2 114 aa11.33□□□□□ -0.6
SS18-219ENST00000581570 ZNF155Q12901 538 aaPredicted RBP11.33□□□□□ -0.6
SS18-219ENST00000581570 ACAP2Q15057 778 aa11.33□□□□□ -0.6
SS18-219ENST00000581570 CYP27C1Q4G0S4 372 aa11.33□□□□□ -0.6
SS18-219ENST00000581570 TMEM201Q5SNT2 666 aa11.33□□□□□ -0.6
SS18-219ENST00000581570 LIPNQ5VXI9 398 aa11.33□□□□□ -0.6
SS18-219ENST00000581570 GAS2L3Q86XJ1 694 aa11.33□□□□□ -0.6
SS18-219ENST00000581570 SAMD14Q8IZD0 417 aaPredicted RBP11.33□□□□□ -0.6
SS18-219ENST00000581570 CENPLQ8N0S6 344 aaPredicted RBP11.33□□□□□ -0.6
SS18-219ENST00000581570 SLC35F6Q8N357 371 aa11.33□□□□□ -0.6
SS18-219ENST00000581570 PPM1NQ8N819 430 aa11.33□□□□□ -0.6
SS18-219ENST00000581570 OR2V1Q8NHB1 315 aa11.33□□□□□ -0.6
SS18-219ENST00000581570 KISS1RQ969F8 398 aaPredicted RBP11.33□□□□□ -0.6
SS18-219ENST00000581570 USB1Q9BQ65 265 aaKnown RBP11.33□□□□□ -0.6
SS18-219ENST00000581570 FARSBQ9NSD9 589 aaKnown RBP11.33□□□□□ -0.6
SS18-219ENST00000581570 FAM120CQ9NX05 1096 aaKnown RBP11.33□□□□□ -0.6
SS18-219ENST00000581570 VDAC3Q9Y277 283 aa11.33□□□□□ -0.6
SS18-219ENST00000581570 SHISA9B4DS77 424 aa11.32□□□□□ -0.6
SS18-219ENST00000581570 TNFSF11O14788 317 aa11.32□□□□□ -0.6
SS18-219ENST00000581570 ADAMDEC1O15204 470 aa11.32□□□□□ -0.6
SS18-219ENST00000581570 ADAP00813 363 aa11.32□□□□□ -0.6
SS18-219ENST00000581570 C2P06681 752 aa11.32□□□□□ -0.6
SS18-219ENST00000581570 ZNF17P17021 662 aa11.32□□□□□ -0.6
SS18-219ENST00000581570 CDH11P55287 796 aa11.32□□□□□ -0.6
SS18-219ENST00000581570 DECR1Q16698 335 aa11.32□□□□□ -0.6
SS18-219ENST00000581570 PDSS1Q5T2R2 415 aa11.32□□□□□ -0.6
SS18-219ENST00000581570 TFAP2EQ6VUC0 442 aa11.32□□□□□ -0.6
SS18-219ENST00000581570 IL17RELQ6ZVW7 336 aa11.32□□□□□ -0.6
SS18-219ENST00000581570 CCDC25Q86WR0 208 aa11.32□□□□□ -0.6
SS18-219ENST00000581570 C1orf52Q8N6N3 182 aaKnown RBP11.32□□□□□ -0.6
SS18-219ENST00000581570 CEP112Q8N8E3 955 aa11.32□□□□□ -0.6
SS18-219ENST00000581570 PTGR2Q8N8N7 351 aaPredicted RBP11.32□□□□□ -0.6
SS18-219ENST00000581570 OR7G2Q8NG99 324 aa11.32□□□□□ -0.6
SS18-219ENST00000581570 SELENOMQ8WWX9 145 aa11.32□□□□□ -0.6
SS18-219ENST00000581570 EXOSC8Q96B26 276 aaKnown RBP11.32□□□□□ -0.6
SS18-219ENST00000581570 HBEGFQ99075 208 aa11.32□□□□□ -0.6
SS18-219ENST00000581570 CACNG6Q9BXT2 260 aa11.32□□□□□ -0.6
SS18-219ENST00000581570 TBL1XR1Q9BZK7 514 aa11.32□□□□□ -0.6
SS18-219ENST00000581570 MANSC1Q9H8J5 431 aa11.32□□□□□ -0.6
SS18-219ENST00000581570 GIMAP4Q9NUV9 329 aa11.32□□□□□ -0.6
SS18-219ENST00000581570 NMRK1Q9NWW6 199 aa11.32□□□□□ -0.6
SS18-219ENST00000581570 SENP1Q9P0U3 644 aa11.32□□□□□ -0.6
SS18-219ENST00000581570 SNX24Q9Y343 169 aa11.32□□□□□ -0.6
SS18-219ENST00000581570 PRR14LQ5THK1 2151 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 IGLV3-32A0A0A0MS00 114 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 A0A0J9YW62 118 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 NDUFB5O43674 189 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 COQ9O75208 318 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 IL33O95760 270 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 ANGPTL1O95841 491 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 PDYNP01213 254 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 PGRP06401 933 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 IL3P08700 152 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 PABPC4LP0CB38 370 aaKnown RBP11.31□□□□□ -0.6
SS18-219ENST00000581570 IGFBP5P24593 272 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 RFX3P48380 749 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 RAC1P63000 192 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 TRAF3Q13114 568 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 RAB35Q15286 201 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 HBMQ6B0K9 141 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 KLC3Q6P597 504 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 SEZ6L2Q6UXD5 910 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 ESPNLQ6ZVH7 1005 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 NUFIP2Q7Z417 695 aaKnown RBP11.31□□□□□ -0.6
SS18-219ENST00000581570 CCDC91Q7Z6B0 441 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 LRRC8AQ8IWT6 810 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 FAM9CQ8IZT9 166 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 ZNF525Q8N782 197 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 BANPQ8N9N5 519 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 OR4F6Q8NGB9 312 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 FAM168AQ92567 244 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 PROX1Q92786 737 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 OSTF1Q92882 214 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 PHF21BQ96EK2 531 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 NSUN5Q96P11 429 aaKnown RBP11.31□□□□□ -0.6
SS18-219ENST00000581570 POTEKPQ9BYX7 375 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 PLA2G12AQ9BZM1 189 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 CHODLQ9H9P2 273 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 BRF2Q9HAW0 419 aa11.31□□□□□ -0.6
SS18-219ENST00000581570 MRTO4Q9UKD2 239 aaKnown RBP11.31□□□□□ -0.6
SS18-219ENST00000581570 KCNS2Q9ULS6 477 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms