RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 PIK3R3Q92569 461 aa18.27■□□□□ 0.52
SMG8-204ENST00000580498 RNASE6Q93091 150 aaKnown RBP18.27■□□□□ 0.52
SMG8-204ENST00000580498 WNT2BQ93097 391 aa18.27■□□□□ 0.52
SMG8-204ENST00000580498 STACQ99469 402 aa18.27■□□□□ 0.52
SMG8-204ENST00000580498 UQCRHLA0A096LP55 91 aa18.26■□□□□ 0.51
SMG8-204ENST00000580498 EEF1E1-BLOC1S5C9J1V9 151 aa18.26■□□□□ 0.51
SMG8-204ENST00000580498 H3BNH8 94 aa18.26■□□□□ 0.51
SMG8-204ENST00000580498 EEF1E1O43324 174 aaKnown RBP18.26■□□□□ 0.51
SMG8-204ENST00000580498 ANGPTL1O95841 491 aa18.26■□□□□ 0.51
SMG8-204ENST00000580498 KIR2DL3P43628 341 aa18.26■□□□□ 0.51
SMG8-204ENST00000580498 CCT3P49368 545 aaKnown RBP18.26■□□□□ 0.51
SMG8-204ENST00000580498 DIO3P55073 304 aa18.26■□□□□ 0.51
SMG8-204ENST00000580498 PTGR1Q14914 329 aa18.26■□□□□ 0.51
SMG8-204ENST00000580498 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.26■□□□□ 0.51
SMG8-204ENST00000580498 OR2A2Q6IF42 318 aa18.26■□□□□ 0.51
SMG8-204ENST00000580498 MARCH3Q86UD3 253 aa18.26■□□□□ 0.51
SMG8-204ENST00000580498 FADS6Q8N9I5 356 aa18.26■□□□□ 0.51
SMG8-204ENST00000580498 SFXN5Q8TD22 340 aa18.26■□□□□ 0.51
SMG8-204ENST00000580498 ADAMTS15Q8TE58 950 aa18.26■□□□□ 0.51
SMG8-204ENST00000580498 FAM120BQ96EK7 910 aaKnown RBP18.26■□□□□ 0.51
SMG8-204ENST00000580498 TUBA1CQ9BQE3 449 aa18.26■□□□□ 0.51
SMG8-204ENST00000580498 DUSP26Q9BV47 211 aa18.26■□□□□ 0.51
SMG8-204ENST00000580498 SFXN3Q9BWM7 321 aa18.26■□□□□ 0.51
SMG8-204ENST00000580498 BTBD2Q9BX70 525 aa18.26■□□□□ 0.51
SMG8-204ENST00000580498 UBQLN4Q9NRR5 601 aa18.26■□□□□ 0.51
SMG8-204ENST00000580498 DUSP22Q9NRW4 184 aa18.26■□□□□ 0.51
SMG8-204ENST00000580498 GIN1Q9NXP7 522 aa18.26■□□□□ 0.51
SMG8-204ENST00000580498 MED11Q9P086 117 aa18.26■□□□□ 0.51
SMG8-204ENST00000580498 EDARQ9UNE0 448 aa18.26■□□□□ 0.51
SMG8-204ENST00000580498 A0A087WZY1 265 aa18.25■□□□□ 0.51
SMG8-204ENST00000580498 GXYLT2A0PJZ3 443 aa18.25■□□□□ 0.51
SMG8-204ENST00000580498 CLCA1A8K7I4 914 aa18.25■□□□□ 0.51
SMG8-204ENST00000580498 SYT5O00445 386 aa18.25■□□□□ 0.51
SMG8-204ENST00000580498 NGFRP08138 427 aa18.25■□□□□ 0.51
SMG8-204ENST00000580498 LAMP1P11279 417 aa18.25■□□□□ 0.51
SMG8-204ENST00000580498 SOAT1P35610 550 aa18.25■□□□□ 0.51
SMG8-204ENST00000580498 CPA2P48052 419 aa18.25■□□□□ 0.51
SMG8-204ENST00000580498 LHX2P50458 406 aa18.25■□□□□ 0.51
SMG8-204ENST00000580498 LASP1Q14847 261 aaKnown RBP18.25■□□□□ 0.51
SMG8-204ENST00000580498 PGS1Q32NB8 556 aa18.25■□□□□ 0.51
SMG8-204ENST00000580498 GRAMD1BQ3KR37 738 aa18.25■□□□□ 0.51
SMG8-204ENST00000580498 SEM1Q6ZVN7 128 aa18.25■□□□□ 0.51
SMG8-204ENST00000580498 LIX1LQ8IVB5 337 aa18.25■□□□□ 0.51
SMG8-204ENST00000580498 ZNF781Q8N8C0 355 aa18.25■□□□□ 0.51
SMG8-204ENST00000580498 FBXO30Q8TB52 745 aa18.25■□□□□ 0.51
SMG8-204ENST00000580498 HOXB13Q92826 284 aaPredicted RBP18.25■□□□□ 0.51
SMG8-204ENST00000580498 C1GALT1C1Q96EU7 318 aa18.25■□□□□ 0.51
SMG8-204ENST00000580498 C3orf30Q96M34 536 aa18.25■□□□□ 0.51
SMG8-204ENST00000580498 ACTRT3Q9BYD9 372 aa18.25■□□□□ 0.51
SMG8-204ENST00000580498 DPY30Q9C005 99 aa18.25■□□□□ 0.51
SMG8-204ENST00000580498 HOXD1Q9GZZ0 328 aa18.25■□□□□ 0.51
SMG8-204ENST00000580498 ASIC5Q9NY37 505 aa18.25■□□□□ 0.51
SMG8-204ENST00000580498 NKIRAS1Q9NYS0 192 aa18.25■□□□□ 0.51
SMG8-204ENST00000580498 GIMAP2Q9UG22 337 aa18.25■□□□□ 0.51
SMG8-204ENST00000580498 ALG1L2C9J202 215 aa18.24■□□□□ 0.51
SMG8-204ENST00000580498 KCNK2O95069 426 aa18.24■□□□□ 0.51
SMG8-204ENST00000580498 HMGN2P05204 90 aaKnown RBP18.24■□□□□ 0.51
SMG8-204ENST00000580498 ACP2P11117 423 aa18.24■□□□□ 0.51
SMG8-204ENST00000580498 ZNF708P17019 499 aa18.24■□□□□ 0.51
SMG8-204ENST00000580498 EFNA1P20827 205 aaPredicted RBP18.24■□□□□ 0.51
SMG8-204ENST00000580498 TBXA2RP21731 343 aa18.24■□□□□ 0.51
SMG8-204ENST00000580498 STARP49675 285 aa18.24■□□□□ 0.51
SMG8-204ENST00000580498 ZNF41P51814 821 aaPredicted RBP18.24■□□□□ 0.51
SMG8-204ENST00000580498 ZNF136P52737 540 aa18.24■□□□□ 0.51
SMG8-204ENST00000580498 CLDN8P56748 225 aa18.24■□□□□ 0.51
SMG8-204ENST00000580498 FBXL19-AS1Q494R0 122 aa18.24■□□□□ 0.51
SMG8-204ENST00000580498 FIGNL1Q6PIW4 674 aa18.24■□□□□ 0.51
SMG8-204ENST00000580498 LRRC34Q8IZ02 419 aa18.24■□□□□ 0.51
SMG8-204ENST00000580498 ANKRD42Q8N9B4 389 aa18.24■□□□□ 0.51
SMG8-204ENST00000580498 SLC16A11Q8NCK7 471 aa18.24■□□□□ 0.51
SMG8-204ENST00000580498 COQ8BQ96D53 544 aa18.24■□□□□ 0.51
SMG8-204ENST00000580498 UCN2Q96RP3 112 aa18.24■□□□□ 0.51
SMG8-204ENST00000580498 YIPF4Q9BSR8 244 aa18.24■□□□□ 0.51
SMG8-204ENST00000580498 PIGMQ9H3S5 423 aa18.24■□□□□ 0.51
SMG8-204ENST00000580498 PIGUQ9H490 435 aa18.24■□□□□ 0.51
SMG8-204ENST00000580498 ABCA12Q86UK0 2595 aa18.24■□□□□ 0.51
SMG8-204ENST00000580498 MYO9AB2RTY4 2548 aa18.23■□□□□ 0.51
SMG8-204ENST00000580498 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.23■□□□□ 0.51
SMG8-204ENST00000580498 DUXAA6NLW8 204 aa18.23■□□□□ 0.51
SMG8-204ENST00000580498 H3BML4 177 aa18.23■□□□□ 0.51
SMG8-204ENST00000580498 ZIC3O60481 467 aa18.23■□□□□ 0.51
SMG8-204ENST00000580498 RCBTB2O95199 551 aa18.23■□□□□ 0.51
SMG8-204ENST00000580498 OXSR1O95747 527 aaPredicted RBP18.23■□□□□ 0.51
SMG8-204ENST00000580498 C6orf47O95873 294 aa18.23■□□□□ 0.51
SMG8-204ENST00000580498 G6PDP11413 515 aa18.23■□□□□ 0.51
SMG8-204ENST00000580498 BGNP21810 368 aa18.23■□□□□ 0.51
SMG8-204ENST00000580498 CLNS1AP54105 237 aaKnown RBP18.23■□□□□ 0.51
SMG8-204ENST00000580498 WNT3P56703 355 aa18.23■□□□□ 0.51
SMG8-204ENST00000580498 FGFBP1Q14512 234 aa18.23■□□□□ 0.51
SMG8-204ENST00000580498 DUSP5Q16690 384 aa18.23■□□□□ 0.51
SMG8-204ENST00000580498 ANXA8L1Q5VT79 327 aa18.23■□□□□ 0.51
SMG8-204ENST00000580498 FBXW10Q5XX13 1052 aa18.23■□□□□ 0.51
SMG8-204ENST00000580498 ATG16L1Q676U5 607 aa18.23■□□□□ 0.51
SMG8-204ENST00000580498 CDC73Q6P1J9 531 aa18.23■□□□□ 0.51
SMG8-204ENST00000580498 LURAP1LQ8IV03 231 aa18.23■□□□□ 0.51
SMG8-204ENST00000580498 UBQLNLQ8IYU4 475 aa18.23■□□□□ 0.51
SMG8-204ENST00000580498 RELL2Q8NC24 303 aaPredicted RBP18.23■□□□□ 0.51
SMG8-204ENST00000580498 NAXEQ8NCW5 288 aa18.23■□□□□ 0.51
SMG8-204ENST00000580498 GIMAP5Q96F15 307 aa18.23■□□□□ 0.51
SMG8-204ENST00000580498 PPP1R36Q96LQ0 422 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms