RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 REXO5Q96IC2 774 aaKnown RBP5.73□□□□□ -1.49
PPP4R1-216ENST00000580283 SECISBP2Q96T21 854 aaKnown RBP5.73□□□□□ -1.49
PPP4R1-216ENST00000580283 RBM24Q9BX46 236 aaKnown RBP5.73□□□□□ -1.49
PPP4R1-216ENST00000580283 REG4Q9BYZ8 158 aa5.73□□□□□ -1.49
PPP4R1-216ENST00000580283 ACKR4Q9NPB9 350 aa5.73□□□□□ -1.49
PPP4R1-216ENST00000580283 ZNHIT6Q9NWK9 470 aaKnown RBP5.73□□□□□ -1.49
PPP4R1-216ENST00000580283 NFU1Q9UMS0 254 aa5.73□□□□□ -1.49
PPP4R1-216ENST00000580283 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.73□□□□□ -1.49
PPP4R1-216ENST00000580283 DPPA5A6NC42 116 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 EEF1E1-BLOC1S5C9J1V9 151 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 EEF1E1O43324 174 aaKnown RBP5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 NIPSNAP2O75323 286 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 ZFAND5O76080 213 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 IMPA1P29218 277 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 SKIV2L2P42285 1042 aaKnown RBP5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 FAM27E3Q08E93 113 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 PRPSAP1Q14558 356 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 RPS6KA1Q15418 735 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 SIX1Q15475 284 aaPredicted RBP5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 KLHL38Q2WGJ6 581 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 ZNF791Q3KP31 576 aaPredicted RBP5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 PTRHD1Q6GMV3 140 aaKnown RBP5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 AFTPHQ6ULP2 937 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 RTL4Q6ZR62 310 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 DNM1P46Q6ZS02 220 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 COLCA1Q6ZS62 124 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 LUZP2Q86TE4 346 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 ASPGQ86U10 573 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 GPALPP1Q8IXQ4 340 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 LRRC25Q8N386 305 aaPredicted RBP5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 RASGEF1CQ8N431 466 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 RAB42Q8N4Z0 105 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 CAMKVQ8NCB2 501 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 OR8K1Q8NGG5 319 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 MAGEC3Q8TD91 643 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 UTP15Q8TED0 518 aaKnown RBP5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 CTNNBL1Q8WYA6 563 aaPredicted RBP5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 ROBO4Q8WZ75 1007 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 KRT35Q92764 455 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 PIK3IP1Q96FE7 263 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 VMP1Q96GC9 406 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 EBNA1BP2Q99848 306 aaKnown RBP5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 SPNS1Q9H2V7 528 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 KLHL31Q9H511 634 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 EXO5Q9H790 373 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 PNO1Q9NRX1 252 aaKnown RBP5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 LCMT1Q9UIC8 334 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 EIF3LQ9Y262 564 aaKnown RBP5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 CADP27708 2225 aa5.72□□□□□ -1.49
PPP4R1-216ENST00000580283 A0A096LNT2 108 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 CD8B2A6NJW9 211 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 A8MV72 311 aaPredicted RBP5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 A8MXE2 369 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 GFYI3L273 518 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 CASKO14936 926 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 LRATO95237 230 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 CCNDBP1O95273 360 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 C1QAP02745 245 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 ALDOAP04075 364 aaKnown RBP5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 PSG1P11464 419 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 ALOX12P18054 663 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 CRYGSP22914 178 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 RPS3P23396 243 aaKnown RBP eCLIP5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 FMO4P31512 558 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 SLC1A1P43005 524 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 SLC37A1P57057 533 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 EIF3EP60228 445 aaKnown RBP5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 ZBED6P86452 979 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 FHL1Q13642 323 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 RUNX2Q13950 521 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 HERC3Q15034 1050 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 TMED2Q15363 201 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 SLC18A3Q16572 532 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 CLEC12BQ2HXU8 276 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 PARP6Q2NL67 630 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 FASTKD1Q53R41 847 aaKnown RBP5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 AADACL2Q6P093 401 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 PLEKHM3Q6ZWE6 761 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 OTOAQ7RTW8 1153 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 KATNAL2Q8IYT4 538 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 RCOR2Q8IZ40 523 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 CA13Q8N1Q1 262 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 MFSD9Q8NBP5 474 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 OR4K1Q8NGD4 311 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 SVIPQ8NHG7 77 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 PTPMT1Q8WUK0 201 aaPredicted RBP5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 ANKRD9Q96BM1 317 aaPredicted RBP5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 NTNG2Q96CW9 530 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 FOPNLQ96NB1 174 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 FERMT1Q9BQL6 677 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 TSSK1BQ9BXA7 367 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 CCDC134Q9H6E4 229 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 LRRC40Q9H9A6 602 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 CALHM2Q9HA72 323 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 CHRAC1Q9NRG0 131 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 DECR2Q9NUI1 292 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 KLHL28Q9NXS3 571 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 UTP6Q9NYH9 597 aaKnown RBP5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 DTX4Q9Y2E6 619 aa5.71□□□□□ -1.5
PPP4R1-216ENST00000580283 LRCH1Q9Y2L9 728 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms