RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 ACSS1Q9NUB1 689 aaPredicted RBP12.38□□□□□ -0.43
GGA3-208ENST00000579743 PROCRQ9UNN8 238 aa12.38□□□□□ -0.43
GGA3-208ENST00000579743 EMC9Q9Y3B6 208 aa12.38□□□□□ -0.43
GGA3-208ENST00000579743 FIS1Q9Y3D6 152 aa12.38□□□□□ -0.43
GGA3-208ENST00000579743 AKAP6Q13023 2319 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 OR2M5A3KFT3 312 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 C16orf97H3BN30 126 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 SCDO00767 359 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 AKAP10O43572 662 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 TBX19O60806 448 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 DIAPH2O60879 1101 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 ATE1O95260 518 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 SYNGR4O95473 234 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 ALOX5P09917 674 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 FPR1P21462 350 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 HPCAL1P37235 193 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 PRIM2P49643 509 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 CTBP2P56545 445 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 CLDN15P56746 228 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 SIRPAP78324 504 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 PON3Q15166 354 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 POU4F3Q15319 338 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 SHEQ5VZ18 495 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 FAM219BQ5XKK7 198 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 CLEC6AQ6EIG7 209 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 GTF2IRD2BQ6EKJ0 949 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 RNF165Q6ZSG1 346 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 ZNF551Q7Z340 670 aaPredicted RBP12.37□□□□□ -0.43
GGA3-208ENST00000579743 GTF2IRD2Q86UP8 949 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 WDR75Q8IWA0 830 aaKnown RBP12.37□□□□□ -0.43
GGA3-208ENST00000579743 NATD1Q8N6N6 113 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 PIGTQ969N2 578 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 STARD4Q96DR4 205 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 CHMP6Q96FZ7 201 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 EGLN2Q96KS0 407 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 PLEKHF2Q9H8W4 249 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 MCTS1Q9ULC4 181 aaKnown RBP12.37□□□□□ -0.43
GGA3-208ENST00000579743 TESMINQ9Y4I5 508 aa12.37□□□□□ -0.43
GGA3-208ENST00000579743 PRRC2AP48634 2157 aaKnown RBP12.36□□□□□ -0.43
GGA3-208ENST00000579743 MED12Q93074 2177 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 IGLV3-32A0A0A0MS00 114 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 TLDC2A0PJX2 215 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 ALG1L2C9J202 215 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 NKX2-2O95096 273 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 NGFRP08138 427 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 KRT16P08779 473 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 LINC00032P0C843 101 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 CD8BP10966 210 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 ZNF17P17021 662 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 ATP6V1C1P21283 382 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 RPL38P63173 70 aaKnown RBP12.36□□□□□ -0.43
GGA3-208ENST00000579743 ADAM8P78325 824 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 IFFO1Q0D2I5 559 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 FOXD4Q12950 439 aaPredicted RBP12.36□□□□□ -0.43
GGA3-208ENST00000579743 KIAA0040Q15053 153 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 GALNTL6Q49A17 601 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 PLXDC2Q6UX71 529 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 SH2D5Q6ZV89 423 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 FAM214BQ7L5A3 538 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 STK32CQ86UX6 486 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 P3H2Q8IVL5 708 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 C10orf107Q8IVU9 208 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 RIBC1Q8N443 379 aaPredicted RBP12.36□□□□□ -0.43
GGA3-208ENST00000579743 METTL25Q8N6Q8 603 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 COX18Q8N8Q8 333 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 ZNF527Q8NB42 609 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 FIG4Q92562 907 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 JADE3Q92613 823 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 ZBTB8AQ96BR9 441 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 REXO5Q96IC2 774 aaKnown RBP12.36□□□□□ -0.43
GGA3-208ENST00000579743 PPP3R2Q96LZ3 170 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 TSSK3Q96PN8 268 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 PRPF18Q99633 342 aaKnown RBP12.36□□□□□ -0.43
GGA3-208ENST00000579743 RNF122Q9H9V4 155 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 UBQLN4Q9NRR5 601 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 GLRX2Q9NS18 164 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 ATAD3AQ9NVI7 634 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 CCL27Q9Y4X3 112 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 KIAA1549Q9HCM3 1950 aa12.36□□□□□ -0.43
GGA3-208ENST00000579743 FAM171A2A8MVW0 826 aa12.35□□□□□ -0.43
GGA3-208ENST00000579743 H3BNH8 94 aa12.35□□□□□ -0.43
GGA3-208ENST00000579743 EIF1AYO14602 144 aaKnown RBP12.35□□□□□ -0.43
GGA3-208ENST00000579743 CTIFO43310 598 aaKnown RBP12.35□□□□□ -0.43
GGA3-208ENST00000579743 GMFGO60234 142 aa12.35□□□□□ -0.43
GGA3-208ENST00000579743 SHBGP04278 402 aa12.35□□□□□ -0.43
GGA3-208ENST00000579743 FGF4P08620 206 aa12.35□□□□□ -0.43
GGA3-208ENST00000579743 PABPC4LP0CB38 370 aaKnown RBP12.35□□□□□ -0.43
GGA3-208ENST00000579743 PPP3CBP16298 524 aa12.35□□□□□ -0.43
GGA3-208ENST00000579743 TBXA2RP21731 343 aa12.35□□□□□ -0.43
GGA3-208ENST00000579743 UGT2B10P36537 528 aa12.35□□□□□ -0.43
GGA3-208ENST00000579743 EIF1AXP47813 144 aaKnown RBP12.35□□□□□ -0.43
GGA3-208ENST00000579743 NKX6-1P78426 367 aaPredicted RBP12.35□□□□□ -0.43
GGA3-208ENST00000579743 FAM27E3Q08E93 113 aa12.35□□□□□ -0.43
GGA3-208ENST00000579743 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.35□□□□□ -0.43
GGA3-208ENST00000579743 PRSS53Q2L4Q9 553 aa12.35□□□□□ -0.43
GGA3-208ENST00000579743 GRAMD1BQ3KR37 738 aa12.35□□□□□ -0.43
GGA3-208ENST00000579743 KRTAP21-3Q3LHN1 58 aa12.35□□□□□ -0.43
GGA3-208ENST00000579743 VWA1Q6PCB0 445 aa12.35□□□□□ -0.43
GGA3-208ENST00000579743 BTLAQ7Z6A9 289 aa12.35□□□□□ -0.43
GGA3-208ENST00000579743 GSPT2Q8IYD1 628 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms