RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 SYT6Q5T7P8 510 aaPredicted RBP10.33□□□□□ -0.76
SKA2-204ENST00000578519 ARHGAP40Q5TG30 622 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 C12orf73Q69YU5 71 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 SLC27A4Q6P1M0 643 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 FIGNL1Q6PIW4 674 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 AHSA2Q719I0 299 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 ANKRD13BQ86YJ7 626 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 C1orf210Q8IVY1 113 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 CLIP4Q8N3C7 705 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 FAM26EQ8N5C1 309 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 MORN4Q8NDC4 146 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 OR4D9Q8NGE8 314 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 OR14A16Q8NHC5 309 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 PIK3R3Q92569 461 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 C12orf43Q96C57 262 aaKnown RBP10.33□□□□□ -0.76
SKA2-204ENST00000578519 ZC3H10Q96K80 434 aaKnown RBP10.33□□□□□ -0.76
SKA2-204ENST00000578519 POLDIP3Q9BY77 421 aaKnown RBP10.33□□□□□ -0.76
SKA2-204ENST00000578519 LHPPQ9H008 270 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 QRSL1Q9H0R6 528 aaKnown RBP10.33□□□□□ -0.76
SKA2-204ENST00000578519 GPN2Q9H9Y4 310 aaPredicted RBP10.33□□□□□ -0.76
SKA2-204ENST00000578519 FGF21Q9NSA1 209 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 MED17Q9NVC6 651 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 ZNF226Q9NYT6 803 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 H2AFY2Q9P0M6 372 aaPredicted RBP10.33□□□□□ -0.76
SKA2-204ENST00000578519 COPS7AQ9UBW8 275 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 CBLCQ9ULV8 474 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 SLC6A14Q9UN76 642 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 BRWD1Q9NSI6 2320 aa10.33□□□□□ -0.76
SKA2-204ENST00000578519 ARHGEF17Q96PE2 2063 aaPredicted RBP10.32□□□□□ -0.76
SKA2-204ENST00000578519 CPED1A4D0V7 1026 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 CDHR4A6H8M9 788 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 OR6C76A6NM76 312 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 EFCAB7A8K855 629 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 C17orf105B2RV13 164 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 TPST2O60704 377 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 RCBTB2O95199 551 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 EPPINO95925 133 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 MT-ND2P03891 347 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 CFIP05156 583 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 BMP7P18075 431 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 PCMT1P22061 227 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 PSMB9P28065 219 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 EPHA2P29317 976 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 RBM34P42696 430 aaKnown RBP10.32□□□□□ -0.76
SKA2-204ENST00000578519 PPICP45877 212 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 SERPINB10P48595 397 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 PCYT1AP49585 367 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 COPZ1P61923 177 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 BTG2P78543 158 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 OCA2Q04671 838 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 GINS1Q14691 196 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 OR1Q1Q15612 314 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 TBCEQ15813 527 aaPredicted RBP10.32□□□□□ -0.76
SKA2-204ENST00000578519 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.32□□□□□ -0.76
SKA2-204ENST00000578519 HLA-BQ31612 363 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 CCNJQ5T5M9 372 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 UBE2UQ5VVX9 321 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 PEAR1Q5VY43 1037 aaPredicted RBP10.32□□□□□ -0.76
SKA2-204ENST00000578519 XAF1Q6GPH4 301 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 LAIR2Q6ISS4 152 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 TSSK4Q6SA08 328 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 CCDC81Q6ZN84 652 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 GDF7Q7Z4P5 450 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 WDR53Q7Z5U6 358 aaPredicted RBP10.32□□□□□ -0.76
SKA2-204ENST00000578519 ZER1Q7Z7L7 766 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 PLPP5Q8NEB5 264 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 OR52L1Q8NGH7 329 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 OR1L3Q8NH93 324 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 SAP25Q8TEE9 199 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 FAR1Q8WVX9 515 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 GGHQ92820 318 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 RFKQ969G6 155 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 VSTM2LQ96N03 204 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 RBCK1Q9BYM8 510 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 CAPN10Q9HC96 672 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 ACOT13Q9NPJ3 140 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 NECTIN3Q9NQS3 549 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 PRDM6Q9NQX0 595 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 PNO1Q9NRX1 252 aaKnown RBP10.32□□□□□ -0.76
SKA2-204ENST00000578519 SEMA4GQ9NTN9 838 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 TMEM74BQ9NUR3 256 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 TVP23BQ9NYZ1 205 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 ERVK-19Q9WJR5 959 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 MED31Q9Y3C7 131 aa10.32□□□□□ -0.76
SKA2-204ENST00000578519 GXYLT2A0PJZ3 443 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 A8MU76 341 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 SLC22A1O15245 554 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 CDC123O75794 336 aaPredicted RBP10.31□□□□□ -0.76
SKA2-204ENST00000578519 BCL10O95999 233 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 CYC1P08574 325 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 GABRB1P18505 474 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 RFX3P48380 749 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 GPR143P51810 404 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 SNRPNP63162 240 aaKnown RBP10.31□□□□□ -0.76
SKA2-204ENST00000578519 DAB2P98082 770 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 CDK5Q00535 292 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 PSG6Q00889 435 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 BNC1Q01954 994 aa10.31□□□□□ -0.76
SKA2-204ENST00000578519 TRA2AQ13595 282 aaKnown RBP eCLIP10.31□□□□□ -0.76
SKA2-204ENST00000578519 C1DQ13901 141 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms