RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 GRAMD1BQ3KR37 738 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 VPS26BQ4G0F5 336 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 ZNF385BQ569K4 471 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 NUP43Q8NFH3 380 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 OR2T11Q8NH01 316 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 CEP70Q8NHQ1 597 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 CLHC1Q8NHS4 586 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 SLC9A6Q92581 669 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 STARD4Q96DR4 205 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 C1GALT1C1Q96EU7 318 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 PGM2Q96G03 612 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 FAM111AQ96PZ2 611 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 TRMOQ9BU70 441 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 BAIAP2L1Q9UHR4 511 aa13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 EIF3LQ9Y262 564 aaKnown RBP13.47□□□□□ -0.25
RN7SL560P-201ENST00000577943 VPS13CQ709C8 3753 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 IGKV1D-16P01601 117 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 CLDN20P56880 219 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 RPS3AP61247 264 aaKnown RBP13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 PRR5P85299 388 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 FAM27E3Q08E93 113 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 FOXD4Q12950 439 aaPredicted RBP13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 PON3Q15166 354 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 SGCBQ16585 318 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 DEFB113Q30KQ7 82 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 GALNTL6Q49A17 601 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 GLYR1Q49A26 553 aaPredicted RBP13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 RFTN2Q52LD8 501 aaPredicted RBP13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 APOOLQ6UXV4 268 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 RNF165Q6ZSG1 346 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 BTLAQ7Z6A9 289 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 GALNT10Q86SR1 603 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 EXOC3L1Q86VI1 746 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 HOMEZQ8IX15 550 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 DDIASQ8IXT1 998 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 CDRT4Q8N9R6 151 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 FBXO30Q8TB52 745 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 FNDC9Q8TBE3 224 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 ZNF764Q96H86 408 aaPredicted RBP13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 ZNF845Q96IR2 970 aaPredicted RBP13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 FCRL1Q96LA6 429 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 OPN3Q9H1Y3 402 aaPredicted RBP13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 TUBB1Q9H4B7 451 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 STOML1Q9UBI4 398 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 VDAC3Q9Y277 283 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 TMED5Q9Y3A6 229 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 DNAJC15Q9Y5T4 150 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 AP4B1Q9Y6B7 739 aa13.46□□□□□ -0.25
RN7SL560P-201ENST00000577943 NAV3Q8IVL0 2385 aa13.45□□□□□ -0.26
RN7SL560P-201ENST00000577943 SHISA8B8ZZ34 492 aa13.45□□□□□ -0.26
RN7SL560P-201ENST00000577943 LSM1O15116 133 aaKnown RBP13.45□□□□□ -0.26
RN7SL560P-201ENST00000577943 NDUFB5O43674 189 aa13.45□□□□□ -0.26
RN7SL560P-201ENST00000577943 TBX19O60806 448 aa13.45□□□□□ -0.26
RN7SL560P-201ENST00000577943 NKX2-2O95096 273 aa13.45□□□□□ -0.26
RN7SL560P-201ENST00000577943 CD79BP40259 229 aa13.45□□□□□ -0.26
RN7SL560P-201ENST00000577943 KIR2DL2P43627 348 aaPredicted RBP13.45□□□□□ -0.26
RN7SL560P-201ENST00000577943 ASMTP46597 345 aa13.45□□□□□ -0.26
RN7SL560P-201ENST00000577943 KCNJ5P48544 419 aa13.45□□□□□ -0.26
RN7SL560P-201ENST00000577943 ADAM8P78325 824 aa13.45□□□□□ -0.26
RN7SL560P-201ENST00000577943 KANK2Q63ZY3 851 aa13.45□□□□□ -0.26
RN7SL560P-201ENST00000577943 PPP4R4Q6NUP7 873 aa13.45□□□□□ -0.26
RN7SL560P-201ENST00000577943 GATSQ8NAP1 163 aa13.45□□□□□ -0.26
RN7SL560P-201ENST00000577943 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.45□□□□□ -0.26
RN7SL560P-201ENST00000577943 HOXB13Q92826 284 aaPredicted RBP13.45□□□□□ -0.26
RN7SL560P-201ENST00000577943 MS4A4EQ96PG1 132 aa13.45□□□□□ -0.26
RN7SL560P-201ENST00000577943 HHATLQ9HCP6 504 aa13.45□□□□□ -0.26
RN7SL560P-201ENST00000577943 ACSS1Q9NUB1 689 aaPredicted RBP13.45□□□□□ -0.26
RN7SL560P-201ENST00000577943 ZNF175Q9Y473 711 aa13.45□□□□□ -0.26
RN7SL560P-201ENST00000577943 TESMINQ9Y4I5 508 aa13.45□□□□□ -0.26
RN7SL560P-201ENST00000577943 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 UQCRHLA0A096LP55 91 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 IGLV3-32A0A0A0MS00 114 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 A0A1W2PPR1 153 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 ALG1L2C9J202 215 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 EMC8O43402 210 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 OXSR1O95747 527 aaPredicted RBP13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 CHRNGP07510 517 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 ACP2P11117 423 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 POU2F1P14859 743 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 HPGDP15428 266 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 DDX5P17844 614 aaKnown RBP13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 EFNA1P20827 205 aaPredicted RBP13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 ALDH3A1P30838 453 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 MAP3K8P41279 467 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 FRKP42685 505 aaPredicted RBP13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 PDE7AQ13946 482 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 FGFBP1Q14512 234 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 FIGNL1Q6PIW4 674 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 ZNF474Q6S9Z5 364 aaPredicted RBP13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 R3HCC1LQ7Z5L2 792 aaKnown RBP13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 METTL25Q8N6Q8 603 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 SLC16A11Q8NCK7 471 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 OR6Y1Q8NGX8 325 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 OR4C3Q8NH37 302 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 OR2W6PQ8NHA6 318 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 TWIST2Q8WVJ9 160 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 GIMAP5Q96F15 307 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 APOPT1Q96IL0 206 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 WFIKKN1Q96NZ8 548 aa13.44□□□□□ -0.26
RN7SL560P-201ENST00000577943 SLC39A3Q9BRY0 314 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms