RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 ALOX5P09917 674 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 NCF1P14598 390 aaPredicted RBP1.45□□□□□ -2.18
TOP2A-202ENST00000577541 TSPAN8P19075 237 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 FUT3P21217 361 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 PAX7P23759 505 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 DNAJB1P25685 340 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 RFC2P35250 354 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 TRPC1P48995 793 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 SLC26A2P50443 739 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 GPC3P51654 580 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 LIM2P55344 173 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 HSD17B7P56937 341 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 CCZ1BP86790 482 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 CCZ1P86791 482 aaPredicted RBP1.45□□□□□ -2.18
TOP2A-202ENST00000577541 EGFEM1PQ0D2K5 195 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 TSTA3Q13630 321 aaPredicted RBP1.45□□□□□ -2.18
TOP2A-202ENST00000577541 BTG3Q14201 252 aaPredicted RBP1.45□□□□□ -2.18
TOP2A-202ENST00000577541 PDIA5Q14554 519 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 CAMK4Q16566 473 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 OR2B11Q5JQS5 317 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 DCST2Q5T1A1 773 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 AGBL2Q5U5Z8 902 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 HIST2H2AA3Q6FI13 130 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 PRR5LQ6MZQ0 368 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 IRGCQ6NXR0 463 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 FAM159AQ6UWV7 190 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 FAM43BQ6ZT52 329 aaPredicted RBP1.45□□□□□ -2.18
TOP2A-202ENST00000577541 MIER3Q7Z3K6 550 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 LHFPL4Q7Z7J7 247 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 CCDC36Q8IYA8 594 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 H1FOOQ8IZA3 346 aaPredicted RBP1.45□□□□□ -2.18
TOP2A-202ENST00000577541 HDDC3Q8N4P3 179 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 ARFGAP2Q8N6H7 521 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 OR56B1Q8NGI3 324 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 DQX1Q8TE96 717 aaKnown RBP1.45□□□□□ -2.18
TOP2A-202ENST00000577541 TMEM37Q8WXS4 190 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 CCDC47Q96A33 483 aaKnown RBP1.45□□□□□ -2.18
TOP2A-202ENST00000577541 SLC25A38Q96DW6 304 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 TBX15Q96SF7 602 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 CTRCQ99895 268 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 TM2D1Q9BX74 207 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 TRPV6Q9H1D0 765 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 RHOJQ9H4E5 214 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 ACTR8Q9H981 624 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 ROPN1Q9HAT0 212 aaPredicted RBP1.45□□□□□ -2.18
TOP2A-202ENST00000577541 EHFQ9NZC4 300 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 P2RX2Q9UBL9 471 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 ZNF221Q9UK13 617 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 KLK12Q9UKR0 248 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 PLA2G4CQ9UP65 541 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 SLC9A8Q9Y2E8 581 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 DHRS7Q9Y394 339 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 CDC42BPBQ9Y5S2 1711 aa1.45□□□□□ -2.18
TOP2A-202ENST00000577541 ASTN1O14525 1302 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 ESYT2A0FGR8 921 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 BICDL2A1A5D9 508 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 C11orf98E9PRG8 122 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 HSF2BPO75031 334 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 CA11O75493 328 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 LYPLA1O75608 230 aaPredicted RBP1.44□□□□□ -2.18
TOP2A-202ENST00000577541 NEBLO76041 1014 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 CA3P07451 260 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 STSP08842 583 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 XRCC1P18887 633 aaPredicted RBP1.44□□□□□ -2.18
TOP2A-202ENST00000577541 UGT1A3P35503 534 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 SLC6A8P48029 635 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 STK19P49842 368 aaPredicted RBP1.44□□□□□ -2.18
TOP2A-202ENST00000577541 HTD2P86397 168 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 OTUD4Q01804 1114 aaKnown RBP1.44□□□□□ -2.18
TOP2A-202ENST00000577541 CNTN2Q02246 1040 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 ORC2Q13416 577 aaPredicted RBP1.44□□□□□ -2.18
TOP2A-202ENST00000577541 MPPED2Q15777 294 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 CARTPTQ16568 116 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 KCTD19Q17RG1 926 aaPredicted RBP1.44□□□□□ -2.18
TOP2A-202ENST00000577541 CCDC40Q4G0X9 1142 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 EOGTQ5NDL2 527 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 FAM120AOSQ5T036 256 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 ASPHD2Q6ICH7 369 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 CXCL17Q6UXB2 119 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 HACD2Q6Y1H2 254 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 SYVN1Q86TM6 617 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 PPP1R27Q86WC6 154 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 PYROXD2Q8N2H3 581 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 KDM8Q8N371 416 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 ZNF433Q8N7K0 673 aaPredicted RBP1.44□□□□□ -2.18
TOP2A-202ENST00000577541 NFAM1Q8NET5 270 aaPredicted RBP1.44□□□□□ -2.18
TOP2A-202ENST00000577541 OR2T34Q8NGX1 318 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 FBXO30Q8TB52 745 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 ADAMTS16Q8TE57 1224 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 SELENOMQ8WWX9 145 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 TBC1D31Q96DN5 1066 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 NSMCE2Q96MF7 247 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 TSGA13Q96PP4 275 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 RTBDNQ9BSG5 229 aaPredicted RBP1.44□□□□□ -2.18
TOP2A-202ENST00000577541 NDUFAF3Q9BU61 184 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 APOOQ9BUR5 198 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 COQ10BQ9H8M1 238 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 GPN2Q9H9Y4 310 aaPredicted RBP1.44□□□□□ -2.18
TOP2A-202ENST00000577541 MEAF6Q9HAF1 191 aa1.44□□□□□ -2.18
TOP2A-202ENST00000577541 PALMDQ9NP74 551 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms